Pecten maximus (king scallop): 117332449
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Entry
117332449 CDS
T07399
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117332449
03036 Chromosome and associated proteins [BR:
pmax03036
]
117332449
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117332449
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117332449
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
Tex_YqgF
HHH_3
SH2
Spt6_S1
HHH_9
Tex_N
OB_RRP5_4th
S1_RRP5
BaffR-Tall_bind
Motif
Other DBs
NCBI-GeneID:
117332449
NCBI-ProteinID:
XP_033747249
LinkDB
All DBs
Position
8:complement(10125802..10171795)
Genome browser
AA seq
1835 aa
AA seq
DB search
MSGFLNDEADVSDVSSEDGNASGSGGSVPGSVKSRSRSRSRSWSGSRSGSGSRSRSRSGS
RSGSGSRSGSGSRSRSRSGSRSGSGSRSRSGSRSRSGSRSMSRSRSRSGSRSRSGSRSGS
GSPARSRSGSGSPARSRSGSGSGSDIEQPKKKKKKKEKNLKKKKSKQITIDDDDDDEEEE
EDDEERIREEMKDLINDEIEEEEESGDESESGKRKHEDDSEIDDQLDDDDLDLIQENLGI
RIKKTKKLKRIRMMSDDEESDKEEEKDRDAIAEELFEHGEGDEGEQIDETIERPETTEYQ
DLEESEDEDDMDNFIVNEDGEPVKKAKKKRHIIHTDAALQEAQDIFGVDFDFEEFDEYAE
GEEEEEEEFEDDEYMEEDEDGVARPRTKKVGRKKGKKKGIFDVYEPTELERGFFTDKDQE
IRTKDMPERFQLRPIPIRPLEEGELDEEAEWIYKQAFTTPTMSQQNLLEQESHGNFGRRP
PSMVNKIREAINFMRDQHLEVPFIAFYRKEYVESDLNINDLWKIWQFDEKWTQLRTRKSN
MVRLFEKMQNYQFEENADPDKVLESNVRALTEEDIDRIKQVQTIEELRDVYQHFLLYYGP
DIPKMRNAEKIKARNEEEGERPENEDPPEQQEMIKQASRKSGYTICQQNKLDDIAQKFGL
SPEQFGENLRDNYQRHDVEQYPLEPLEVAKEYICSQFPTDEEVLLGARHMVAMQICHDPL
VRQCVRQTYFERAKINVVPTKKGIKEIDEAHPCYAMKYLKNKPVKDLKDEIFLKLTQGEE
DGLLTISMFIDDVSENSQTYFEEVRQLFYRDEFSHLVQQWNLQRSQAMERALNKLLYPQM
EKELRAKLIAEAKEGILKACCRKLYNWLKVAPYQADQQLEDDYDYDEKEGLRVLGLSFIT
TRDTPGFGALIDGEGQVTDFIRMPYLTKRRNAWRQQDKEGKEQDMEKLKDFISTKKPHVV
AVSAESRDALMVIEDVKSVVDDLCQEQQMAPISVELVDNELAMVYENSAKAQSEFREYPV
VLRHAVSIARRLQDPLIEFAQLCNVDEDILCLKYHPMQDQIPKDDLLNALSLEFVNRVNE
VGVDINRAIANSHTAPLVQFVCGLGPRKASQLLKILKQANIRLENRTQLVEVCHMGPNVF
INCAGFIKIDTNSLGDSTDAYVEVLDGSRVHPENYEWARKMAVDALEYDDTAEDANPAGA
LEEILESPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELNHRYKDLRTPYRSPLNEE
RFNMITKETPETFYVGKLILTTVAGIAHRRPRGDQLDQANPVRDQETGLWKCPFCNKDDF
PELSEVWSHFDAGSCPGSAIGVRTRLDNGVTGFIHTKNISDKMVKNPEDRVKVGMTIHCR
ITKIDIDRFQVDLTCKSSDLMDKDGHWKPPKDLYYDQDTEKESADKEEEKRKQQARQTYT
KRVIAHPSFHNIGYKECEKLLSDMDQGEAIIRPSSKGSDHLTVTWKVGDGAMQHIDVKER
GKENAFSLGTTLVIGTEEFEDLDEILARHVQPMAALARDIMNFKYFKEFESGKREIVDKI
LLEEKKKGPSRIPYYMSLSKQYPGKYLISYMPRTKARHEFITLMPDGLRYRQQNFHSLNS
LIRWFKEHFRDPIPGTPASARTPMVSSNYATPSINLQGVDAATIQRAAAGLPSNIYNTLA
QVAGAATPRIPRTTPGATPQFGSALHGTGFNIPLGTTPLMTPMMTPQHHITTPQVLNTPS
YQPTPRAAATPVWPGATPRATPRSMGTPSHPSQQPQRPAPSTTQEWAKPGTDWAKAAAMW
AKGRQKPSTPRSGQSPAVRASPMEQGDSTPLIDER
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttttttgaatgatgaagcagatgtgtcggatgttagttcggaggatggaaat
gccagtgggagtggtggttcggtacctggatctgtgaagtcaaggtcccggtcacgatcc
agatcatggtcaggatcaagatcaggatccggttctcgatcaagatctagatcgggctcc
agatcaggatcaggctcacggtcaggttcaggctccaggtcaaggtcaaggtctggttcc
aggtcagggtccggctctaggtcaaggtcgggctccaggtcaagatccggctccaggtca
atgtcacgttccagatcaaggtcaggttccaggtcaaggtcaggatctaggtctgggtca
ggttcaccagccaggtcgaggtcaggatcagggtcaccagcaaggtcaagatctggttcg
ggttctggttcagatatagaacaaccaaagaaaaagaagaaaaagaaagaaaagaacttg
aaaaagaaaaagagcaaacagatcacaatagatgatgatgacgatgatgaagaggaggaa
gaagatgacgaggaaagaatacgagaggaaatgaaagacctgatcaatgatgaaattgaa
gaggaggaggaaagtggagacgaaagtgaaagtggcaaaagaaaacatgaagacgactca
gaaattgatgatcaactggatgatgatgatcttgatctcattcaagagaacttaggaatc
cgtatcaaaaagacaaaaaagctgaagcgtattcgtatgatgtcagacgatgaagaaagt
gacaaagaagaagagaaagatcgtgatgctattgctgaagaactgtttgaacatggtgaa
ggtgatgaaggcgagcaaatagatgaaaccattgagcgaccagaaaccacagagtaccaa
gatcttgaggaatctgaagatgaagatgacatggataatttcattgtgaatgaagatgga
gaacctgtcaaaaaggctaagaaaaagcggcacatcatccacacagatgcagccttacaa
gaagcccaggatatttttggagtggattttgattttgaggagttcgatgagtatgctgaa
ggcgaagaggaggaagaagaagagtttgaggatgacgagtacatggaggaggatgaagat
ggagttgctcgaccaaggactaaaaaagtcggacggaagaagggaaaaaagaaaggcatt
tttgatgtgtatgagccgacagaattggagcgtggatttttcacggacaaggatcaggaa
atccgaaccaaggacatgcctgagcgatttcaattacgaccaatccccatacgccccctt
gaggagggagagttagatgaagaagctgagtggatatataagcaggcctttacgactcct
accatgtcacaacagaacctgttggaacaggagagtcatggaaactttggccgacgtcca
cccagcatggtcaacaaaatccgagaggcaatcaatttcatgagggaccagcaccttgag
gtgcccttcatagccttttatcgcaaagagtatgtagaatctgatctcaatatcaacgac
ctgtggaagatctggcagtttgacgaaaagtggacacagctgaggaccaggaaatccaac
atggtccgtctgtttgagaagatgcaaaattaccagtttgaggaaaatgctgatcctgac
aaggtcctggagtctaatgtgagagctctgacagaggaagatattgacaggatcaaacaa
gttcagacgattgaggagctgagggatgtctaccagcatttcctgttatattacggaccc
gatatcccaaaaatgcggaatgctgagaaaattaaggctcgtaatgaggaggaaggggaa
cgccctgaaaatgaagatcctccagaacaacaagaaatgataaaacaggcctcccgtaaa
agtggctacaccatatgccaacagaataagctggacgacattgcccagaagtttggcctg
tcaccagaacagtttggtgagaatctacgtgacaactaccaacgtcatgatgttgaacaa
tatccattggagcccctcgaggtggccaaagagtatatttgcagtcagttcccaacagat
gaggaagtcctacttggtgcacgtcacatggttgccatgcagatttgccatgatcctctt
gtgcggcagtgtgtgcgacagacgtattttgaacgtgcaaaaattaatgttgtcccaacc
aagaagggcataaaggagatcgatgaagcccatccatgttatgccatgaaatatctcaag
aacaaacctgtcaaggacctgaaggatgagatattcctcaagctcactcaaggagaagaa
gacggcctgttgacaattagcatgtttattgatgatgtgtcagaaaattcccagacgtac
tttgaggaagttcgccagctgttctacagggatgagtttagccacctggtgcaacagtgg
aatcttcagagaagccaagccatggagcgagcccttaataagctcctttaccctcagatg
gagaaggagctccgagccaagctcatagcagaagccaaagaaggaatcttaaaggcttgc
tgtcgaaagctgtataactggctgaaagtggcgccgtaccaggccgatcagcaacttgag
gatgactatgattacgatgagaaggagggtcttcgtgtgttgggcctgtctttcatcaca
acaagagacacgcctggctttggagctctgattgatggagagggccaagttacagacttc
atacgaatgccgtatctcacgaaacgacgaaatgcttggaggcaacaggacaaggagggc
aaggaacaagacatggaaaaattaaaggatttcatttccaccaagaaaccccatgtggta
gctgtctctgcagaatcgagggatgcacttatggtgatagaggacgtgaagtctgtggta
gatgatctttgtcaggaacagcagatggcccccatatctgtggaacttgtggacaatgag
ctcgccatggtctacgaaaacagcgccaaagcgcagagtgagttccgagaatatcctgtg
gtactgcgacatgctgtttccatagcaaggagactacaggaccctctaatcgagtttgcc
cagctgtgtaatgtagacgaggatatcctttgtctcaaatatcaccccatgcaggaccag
attcctaaggatgacttgttaaacgctctgtcacttgagtttgtgaacagagtcaacgag
gtcggtgtcgacattaaccgagcgatagctaacagccacacagcaccacttgtacagttt
gtgtgtggacttggacctaggaaagcatcacaacttctaaagattctgaagcaggccaac
atccgactggagaacagaacacagctggtggaagtgtgtcacatgggccccaatgtcttt
atcaattgtgctggattcataaaaattgacaccaacagtctgggtgacagcacggatgca
tacgttgaagtgttggacggctcaagagtccacccagagaactacgagtgggcaagaaag
atggctgttgatgcacttgagtacgatgacacagctgaggatgccaaccctgccggtgcc
ctggaggaaatccttgaatctcctgaacgtttgaaagaccttgatcttgatgcatttgct
gaggagcttgaaagacagggctatggtgacaaacacataacactttatgacataagagct
gagttaaatcatcgatacaaggatctgaggacgccgtaccgatcaccgctgaatgaggag
cgtttcaacatgatcacgaaggaaacaccagagaccttctatgttggtaagctgatatta
acaacagtggcagggattgctcaccgacgaccccgaggagaccagcttgaccaagctaac
ccggtccgcgaccaggaaacaggcctatggaagtgtcccttctgtaacaaagatgacttc
cctgaacttagcgaggtgtggagccattttgatgccggcagctgtccagggtcagcgatt
ggtgtgaggacgagactggacaatggcgtgacgggtttcatccacactaagaacataagt
gacaaaatggtcaagaatccggaggatcgagtcaaagttggaatgaccattcattgtcgg
atcaccaaaattgatattgatcgcttccaggtagatctgacttgtaaatcttcagatctc
atggataaagatggacactggaagccacccaaagatctgtattatgaccaggacacggaa
aaggaaagtgctgacaaagaggaggaaaagcgtaaacaacaggcgagacagacctataca
aagagagtcattgctcacccttcgttccataacatcggctacaaagagtgtgaaaagctt
ttgagtgatatggatcaaggcgaggcgatcatcagaccaagcagcaagggttcagaccat
ctaacagtaacgtggaaggttggggatggagccatgcagcacattgatgtaaaagaacgg
ggcaaggagaacgcttttagtcttggaactactctggtcatcggtacagaggagtttgag
gatctcgacgaaatcttggcacgacatgtacagccaatggccgccctcgccagagatatc
atgaacttcaaatacttcaaggagttcgaaagcgggaaacgtgaaatagtagataaaatt
ctgctagaagagaaaaagaaaggtccttcaaggatcccttattacatgagtctgtcaaag
caatatcctgggaagtatttgatatcgtacatgccgaggacaaaagcccgccatgaattt
atcacactgatgccagatggtctccggtaccgacagcagaacttccactctcttaattca
ctaatacgttggtttaaggaacatttccgggatcccattccaggtacccctgctagtgcc
cggacccccatggtgtcgtcgaactatgccacaccgagcatcaacctgcaaggagttgat
gctgctaccattcagagagcggccgcagggttgcctagcaacatctacaatactctcgcc
caagtggcaggtgcagccactccacggatcccgagaaccacacctggtgccacgccgcag
tttggctctgccctccatggcacaggattcaatattcctctgggtactacacctctgatg
accccaatgatgaccccacaacaccatatcactacaccacaagtgttgaacacaccctcc
tatcagccaacacctcgcgctgctgccacccctgtttggccaggagcaaccccacgtgct
actcctcgcagtatgggaacgccgtctcatccttcacagcagccgcagaggccggcgcca
agtaccacccaggaatgggccaagcctggtacagattgggccaaggctgctgctatgtgg
gccaaggggcgacagaaaccaagcacacctcggtctggacagagtccagcagtacgggcc
agtccaatggaacaaggcgactcaacgcctcttattgacgagcgatga
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integrated database retrieval system
