Pecten maximus (king scallop): 117332544
Help
Entry
117332544 CDS
T07399
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117332544
09122 Translation
03013 Nucleocytoplasmic transport
117332544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117332544
03041 Spliceosome [BR:
pmax03041
]
117332544
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117332544
Spliceosome [BR:
pmax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117332544
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
117332544
NCBI-ProteinID:
XP_033747384
LinkDB
All DBs
Position
8:complement(13817068..13835582)
Genome browser
AA seq
695 aa
AA seq
DB search
MASKDEPVKTEIKRKRTIRKETTSIAASGDSKRIKSDAAVKESKSGLFFAEEEEVDSRNP
QNDLTTFRKTCEEIRTAMAEIKKLKEKKGKDYSEEIEEKKINALLQFVVLKKLNRLAHVR
CKKVRDATSETKQRIDQYHLQLQNLLYETMHLEKEITRCLEFKSKDEEIELVSVDEFYQE
APKDISRPEVTKSDSHQKTLARLDWELEQRKRLDLKLKEAKDNKEKLEQEIKTKQEYLEN
LQPKLNTILQSTKPVQEYLGMPFDQIREQHQTACHLPHPLYVLYMQSSAYKQACDKHLEV
RIEGDLQAAKSIKSSVTEIDEDSDSDQEEQDKPASKRRRKTSDSRVSDRKNRALQRHPLA
VVMEISCRDGGCLHLTFHYQMSLEIITVDTKFQPSPDNVTSSISGGDLLSAESVLNDIYP
GDHGNTTPNPANQYELRRLGLRDFTHYIPELGRPFLWAQWLGGLQFLDHDSPLKAQSSIS
SAHMQQTVKLLRRRIRSRTSLLQQLASLERGSIQVNKDYLPLFPAKIVARLVSWKRSTYE
DFSVLPHARSAITAGLAGESDLYFTAIMERSSAKMTVQVVLTANYPEVVPWFVVGVQWQT
NRTALNDSHIQAMEEEVNLHYQELMKEKSHDQILSNQMQRLMMCFDIYLETEAQNTESEG
PMEISKEKVFTRVTRGPNRTKPYMFCPEVGIFTHR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaagacgaaccagtgaaaaccgaaataaagaggaaaagaacgataaggaaa
gaaaccacgtcgattgcagcgtcaggagatagcaagaggataaaaagtgatgccgcggtc
aaggaaagtaagagtggccttttctttgctgaggaagaagaggtagatagccggaatcca
cagaatgaccttacaaccttcagaaaaacatgtgaagaaataagaacagcaatggccgag
atcaagaaactcaaagaaaaaaagggcaaagattattctgaagaaatcgaagaaaagaag
ataaatgctctccttcagtttgtggtcctgaaaaaactgaatcgcttggctcatgtgcgg
tgtaagaaagtgcgagatgccaccagtgagaccaaacagagaatagaccagtatcaccta
cagctacagaacctcctttacgagaccatgcacctcgagaaagagatcacacgctgcctg
gaattcaaatccaaagatgaagaaatagaacttgtgtcagttgatgagttctatcaagag
gcaccaaaagatatttcacgcccggaggtgacaaagtccgacagccatcagaaaacactt
gcccgacttgactgggaactagaacagaggaagcgtctggacctgaagctgaaggaagcc
aaggataacaaagagaagttggaacaggaaataaagacaaaacaggaatacttagaaaat
ctacagccgaaactcaacacaatattacagtccaccaagccagtacaggagtacctgggg
atgccatttgaccagatccgggagcagcatcagacggcatgtcacctgccacatcctctc
tatgtcctgtatatgcagtcaagtgcctacaaacaggcatgtgacaaacacctggaagtg
aggattgagggagatttacaggcagcaaagtccataaagagttcagtgacagagatcgat
gaagacagtgatagtgaccaggaggaacaagataagccagcatctaagcgccgcaggaaa
accagtgacagtcgtgtatcagatcgaaagaaccgtgccttacagcgccatcctcttgcc
gttgtcatggaaatcagttgtcgggacggaggctgccttcaccttacatttcactaccaa
atgtcactagagattatcactgttgataccaagtttcagcccagcccagacaatgtcaca
tcatccatcagtggaggggacctactgtcagcagaatcagtccttaatgacatctaccct
ggtgaccatggaaacacaacacctaatccagccaatcagtatgaacttcgcagactgggc
ttgagagacttcacccactacattcctgagttaggtcgtcctttcctttgggctcagtgg
ctgggtggtctacagttcctggaccatgacagtcccctcaaggcccagagctctatctcc
tctgcccacatgcagcagacggtgaaactgcttcgccggaggatcaggtctcggacatct
ctgttacaacaactggcatcattagagcgtggatctatacaagtgaacaaggactacctc
cccttgtttcctgccaaaattgttgcacgcctggtgtcatggaagcgatcaacatatgag
gacttcagtgtgttgccacacgcccgctccgccatcacagctggtctggcaggagagtcc
gatctgtactttacagccatcatggaaaggtcctcagctaagatgacagtccaggtggta
ctcacagccaattacccagaggtggtcccttggtttgttgtcggtgttcagtggcagaca
aacaggacagcacttaatgactctcatatacaggcaatggaagaggaggtcaatttgcat
taccaggaattgatgaaggaaaaatcacatgaccagatcctatccaatcaaatgcaacgt
ttaatgatgtgctttgatatttatctggagacagaggctcaaaatacagaaagtgagggt
ccaatggagatctccaaggaaaaggtgttcaccagggtaaccaggggcccaaaccgtacc
aaaccctatatgttctgtccagaagtgggaatcttcactcatcgttga
DBGET
integrated database retrieval system
