Pecten maximus (king scallop): 117332948
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Entry
117332948 CDS
T07399
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03030
DNA replication
pmax03410
Base excision repair
pmax03420
Nucleotide excision repair
pmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117332948
03410 Base excision repair
117332948
03420 Nucleotide excision repair
117332948
03430 Mismatch repair
117332948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmax03032
]
117332948
03036 Chromosome and associated proteins [BR:
pmax03036
]
117332948
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117332948
DNA replication proteins [BR:
pmax03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117332948
DNA Replication Termination Factors
ELG1-RFC complex
117332948
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117332948
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117332948
Check point factors
HRAD17(Rad24)-RFC complex
117332948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_16
AAA_22
Rad17
AAA_24
RCF1-5-like_lid
AAA_14
Mg_chelatase
Viral_helicase1
AAA_11
RuvB_N
nSTAND3
AAA_assoc_2
DNAX_ATPase_lid
AAA_19
MipZ
AAA_25
AAA_5
ABC_tran
AAA_18
AAA_28
Gp44_lid
AAA_30
AAA_23
MeaB
SLFN-g3_helicase
RNA_helicase
NTPase_1
DUF815
bpMoxR
MCM
FtsK_SpoIIIE
ATPase_2
Motif
Other DBs
NCBI-GeneID:
117332948
NCBI-ProteinID:
XP_033747925
LinkDB
All DBs
Position
8:25269912..25279410
Genome browser
AA seq
351 aa
AA seq
DB search
MADVEVMEVDTVESTKTKPKAGGSSGSSHELPWVEKYRPTKLQDIVGNEETISRLQVFAR
DGNVPNVIIAGPPGTGKTTSILCLARALLGPSYRDAVLELNASNDRGIDVVRNKIKMFAQ
QKVTLPKGRHKVIILDEADSMTDGAQQAMRRTMEIYSKTTRFALACNASDKIIEPIQSRC
AVLRYSKLTDAQVLKRLLEICEQESVSYTDDGIEAIVFTAQGDMRQALNNLQSTHQGFGH
VNSENVFKVCDEPHPVLVKDMLQHCVNGALEDAYKVMAHLWKLGYSCQDIMTIVFRVCKT
HSMPEFLKLEFIKEIGYTHMRIAEGVSSLLQLSGMLARLCKISATPNSLGQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtagaagtaatggaagtggacactgtcgagtcaacaaaaactaaacctaaa
gctggaggcagctctggatcaagtcatgagctaccatgggttgaaaagtatcggccaaca
aaattacaagacatagtcggaaatgaagaaaccatcagtcgacttcaagtgtttgccaga
gatgggaatgtgcctaatgtgatcattgctggtcctccaggaacaggaaagacaacaagt
atactgtgcttggcccgagccttactaggaccctcctacagagatgctgtgctggaactg
aatgcttctaatgacagaggtattgatgtggtgaggaataaaatcaagatgtttgcccaa
cagaaagtcacactacctaaaggtcgccacaaggttataatccttgatgaagccgacagc
atgactgatggggcacaacaagccatgagaaggacaatggaaatatattccaagacaaca
cgatttgcacttgcctgtaacgcatcggataaaatcattgaaccaatccaatccagatgt
gctgtgttgcggtattccaagttaacagatgctcaggttctaaaacgattactggagatc
tgtgagcaggagagtgttagctatactgacgatggaatcgaggccattgtatttactgcg
cagggagacatgagacaggcattaaataatctgcagtccacacatcaaggatttggacat
gtgaacagtgagaatgtattcaaggtatgtgatgagccacaccctgtactagtgaaagac
atgctgcagcactgtgtaaatggagccctggaggatgcctacaaggtcatggctcatctg
tggaagcttggttattcctgccaggatattatgactattgtgttccgtgtgtgtaaaaca
cacagcatgccagaattcctcaaactcgagttcatcaaggagataggctacacacacatg
aggatagcagaaggtgtgagctccttactccagctctcagggatgctagccaggctttgc
aaaatatcagcgacaccaaattcacttggacaatga
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