Pecten maximus (king scallop): 117333035
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Entry
117333035 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117333035
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117333035
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
117333035
NCBI-ProteinID:
XP_033748042
LinkDB
All DBs
Position
8:27268829..27300404
Genome browser
AA seq
2052 aa
AA seq
DB search
MNHPNPSGNGCSLEDCYANIFALTDICGIKWRKLTAKADYSPNTVDHLEDPVLESYSRCI
QADILCVWRRVQRYSDQPQRVIDQLSHHKELWIFWYGDEPSVLGNLLSPYLDESEHGSWD
KDKDKDKDNSLSYECRTLLFKALHNLIEKCLLSKGFARLGRWFVQPFDSTQANTERGTHL
SFSFNFFLHGESSVCGSIDVKQHPPVWNLTPQHLTLAQENQANFQVILAPYGLNGTLTGN
SYRETDQSAHKILEEWGRFYPLNADDLKDDASRPPPLVEVIVAGVRMKYPSCYVFLCDSE
ESPARAAPLCYSTSRGQSGGQMTPPVSPENLVGGETGIKILPSLHYSGNPSELNTDIVAN
TANAFSIQIRNRVSQDNCVTSGIVKRSTETYNDSNVAGVWEFNDPTAKTNCNCLRHRANK
AKQSLASHGKGPNTAGTKHQKGENPEKLDRQQSRVNRSLTSFHRRAPLTDDLLQFDMMGM
MPQVQPLPPPTANFSSTASANVLPQLNEGVGVESPSPAAPSPLDEPHSQTVVNPSVDPTM
PKLSPHPPAEETAEKEVGAAVGKPAAESVINGGVDNVAKPTENASSVSQKALTDSVFSPN
SWPTSQGDIVKNSNVNSWISSQQRQIDSMNLKRPVLPSKDCEQDELVTNALYSFEQVNVW
NNFPVKKARVEGLYLANLMGSQVPHDPRQNSMPSPAQKNHKPSTPQPSAPDIYEFSDEAS
INPSPISTRSFRSSRDDRSSFSKMEDDKDPSRHNSDSFMFPDRASHGGESLGSPPETPNP
VPTPSLTHEYDLRPTQSDLDHIFDDSDNEDPFTSPSVVAEKATEEKKFPASLASAVISDG
SIAASELMRMYPTPPSNPESCHDTAMEVSCVEIKPVIKSEIFQCGSNPVEDFSRDWSYVY
NQPTAARFDMSSKYSPVDLPSANGQLSPIQQPPDYKASWQFQMPIMEKPNPTSYINVPSI
ENIPSLSSRMPSSAVAASPAPFQNSVGQQRTPMSYELQSPASNASSYLNKTLNSIDNSGT
NNQMPEVHSLIVNITLSDSRLNLFRDYNFDSCNICVCQMSIKGVDVGLYMPDPSGAPPEP
PERCSCGFSAVVNRRVGHNAGLFYEDEVEITGIRDDRYDQRKPSLLAMEYQQKDNNKSED
FNQMEMELLLGQFTMPYSSFAATDHMFKLWLSNSSHYSGSVFDLLQLQDGNEVSYQALDQ
GRQAMEHCPPCKLDDPHMKKSCLHKWQFLQGAGRIPQNSQDSVRLLKTLQPLLQDAIQNS
RVTRLWEHTYKLSGPLTWKEFHQLAGRGADENSAPQPIPSFLVGYDRDWLSVSPHALHFW
DKQFLEPYGKPRDIAYVVLSPENDYIVNAVKLFFKELSTVYGMSKMGRHCPASKVLRDGI
MRVGRKAAETVVNESVDEWFTQIGDSPVAEKLRLYAKVCLHRLSPYLSQNMDMKSLFEPT
TTHRPGYKTPDSSAPIPTPASSVPNLQSDHSTFNVPTSQANSSEDKENSTQENGEPQKDM
SFGRQDDEDENTNCPALVIYIVNPFTYGHEWDSSLDRLVHTGLLKCYQALVKTLPPQLQQ
NINLQMVPLKTILENTEKGSNTQLLKSMSFSVFNMCGWNLVHTVMGRSLTGFGPAAAADR
LLKKKEVEKNRLYSPPFILAPTKDKQAILAESTCGEKIEKSNVLFCVYCLSEDQRWLLGV
CTDECGELMETCTINIEIPNRNRRRKASARKIGLKKYWDFILGVVSVVASPCRLVISRFG
RIGHGEMKGWSGLLSKKNIMRVSKQVKESCVQCSLLSSTDVPGVVSACLVSLEAQPSFHI
MADAVKLEEKMSSKCPLQTPRDTSVTHILVFPTSAKAQANSSASEPSGGMDIVNHNLMED
NILECLETDFNADTDEDLSFLNLFESLKSDPLPNIPGSPTGMDTGHHPSIGMNDHSSIGQ
NMSGSDPQDEPTNLLQQPLAMGYYLSTARHGPLPRWFWSSAPENENHTLSCFKAALHVHN
SQKHDDFMQSTQNRNSHPLDSGLTCDVLRYVLENFNSLSWLTYDVVENDRQSCLPIHFVV
LLQMYHALNAFV
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacccaaatccatcaggcaacggctgttctctggaggattgttacgccaacata
tttgcattgacggatatttgcgggataaaatggaggaaattgacagccaaagctgattat
agcccaaatacggttgatcatttggaggaccccgtgctcgagtcctattccagatgcatt
caggccgatattctctgtgtttggagaagggtacaaaggtattcggaccaaccacagagg
gttatagatcagctgtcccaccataaggagttgtggatattttggtatggtgatgaaccg
tctgtccttggtaacctcctgtctccatatttagatgaatctgaacatggatcatgggat
aaagacaaagataaagacaaggataactctctctcttatgagtgccgtacattactcttt
aaagcccttcataacctcatagaaaaatgtctgttaagtaaaggttttgccaggctcgga
agatggtttgtgcaaccttttgactccactcaagccaacacagaaagaggaactcatctg
tccttcagtttcaactttttcctgcatggagaaagctctgtgtgtggcagtattgatgtt
aaacaacacccacctgtatggaatctaactccacagcacttgacattggcacaagaaaat
caggccaatttccaagtcatccttgcaccctatggattaaatggaaccctgactggaaat
tcctacagagaaaccgaccaatcggcccacaaaattctggaggaatggggacgattttac
ccccttaatgctgatgatctgaaagatgatgcaagtcgcccacctcctctggtggaagta
attgttgctggagtccgaatgaagtacccatcttgttatgtgttcttatgtgactctgaa
gaatctccagctcgtgcagccccactctgttactccacatctcgtggtcaatcaggtggt
caaatgactccgccagtctcaccagaaaatctagttgggggtgaaactggtatcaaaata
ctaccttccctccactactctggcaatccaagtgaactcaacacagatatagtagctaat
actgcaaatgcattcagtatccagatacgcaacagagtcagtcaggataactgtgtcaca
tcaggcatagtcaaaagatcaactgaaacctacaatgacagcaatgttgcaggggtatgg
gaattcaacgatcccactgctaaaacaaactgcaactgtctaagacacagagcaaacaaa
gcaaagcagagtctggcgagtcatgggaaaggtcccaataccgctggtaccaagcatcag
aagggggagaacccagagaaacttgatcgtcagcaatcacgtgtgaatcgaagtttaact
tctttccacagacgagcacccttgactgacgatttgcttcagtttgacatgatggggatg
atgccacaagttcaacctcttcctccacctactgccaacttcagctctacggcaagtgcc
aatgtgttgccccagcttaatgagggagttggagtggagtctccatctccagcagccccc
tcaccattggacgagccccacagtcagactgttgtcaaccccagcgttgaccccaccatg
cctaaacttagcccccaccctccagctgaggaaacagctgaaaaggaagtgggtgcagca
gttggaaagcctgctgcagaaagtgttatcaatggaggagtggacaatgttgccaaaccg
acagaaaatgcctcctcagtctcccaaaaggctttgacagacagtgtattttcacctaac
tcatggccaacaagccaaggagacattgttaagaattctaatgtaaatagctggatttcg
tctcagcaacgccagattgattctatgaacctgaaaaggcctgttttaccttcaaaggac
tgtgaacaagatgaactagtcacaaatgctttatacagctttgaacaagtcaatgtatgg
aataactttcctgtgaaaaaggccagagttgagggtctgtatctggccaacttaatggga
tcacaggttcctcatgatccacgtcagaatagtatgccaagcccggcccagaaaaatcac
aagccctcaacaccccagccctcagctccagacatatatgagttctctgacgaagcctct
atcaacccatccccaatctcaacacgaagctttcgaagcagtcgtgatgatcgttcttca
tttagtaaaatggaagacgacaaggaccccagtagacacaatagtgattcttttatgttt
cctgatcgtgcatcgcatggaggagaatcgttgggttcaccacctgagacaccaaatcct
gtcccgacacctagcctgacacatgagtatgatctccgaccaactcagagtgatctggat
cacatctttgatgactcggataacgaggatccttttactagtccaagtgtagttgcagaa
aaggcaacagaggaaaagaagtttccagcatcccttgcaagtgctgtgataagtgatgga
tcaatagctgcttcagagttgatgaggatgtatcccactccaccgtctaacccagagtcc
tgtcatgacacggccatggaggtgtcctgtgttgaaataaagccagtaatcaaatcagag
atcttccagtgtggcagtaacccagtggaagacttttctagggattggtcttatgtgtac
aatcagccaactgcggctcggtttgacatgtcaagtaaatactcgccagtcgatcttcct
agtgctaatggtcagttgtctcctatccaacaaccacctgactacaaagcatcatggcag
ttccagatgcccatcatggaaaaaccgaacccaacaagttatataaatgtgccgtccata
gagaacatccccagtctctcttcacgcatgccctctagtgctgtggcggcgtcgccagcc
ccgttccagaacagtgttggccagcagcgcactcccatgtcatatgagcttcagtctcca
gcatctaatgcatcgtcttatcttaacaagactctcaactctatagacaattcaggcaca
aacaatcagatgccagaggtacacagtctcatcgttaacataacattgtctgactcgaga
ctcaacttattccgtgattataactttgatagctgcaatatttgtgtgtgtcagatgagc
attaagggtgtggacgtgggactttacatgcccgacccaagtggtgctcctcccgagcca
ccagaacggtgctcgtgtggcttcagtgctgttgtgaatcgtcgagttggacacaatgct
ggcctgttttatgaggatgaggtagagattacaggcatacgcgatgatcgttacgaccaa
aggaaacctagtttgttagctatggaataccaacaaaaagacaataataagtccgaagac
ttcaatcaaatggaaatggagttacttttaggacagtttacaatgccctactcttcattc
gctgctacagatcacatgttcaaactatggctctccaactcttcacattattcaggatca
gtctttgatcttctgcagctacaggatggaaatgaggtgtcatatcaggcactggaccag
ggacgtcaggccatggaacactgcccaccatgtaaactagatgatccacatatgaagaag
agctgccttcacaagtggcagtttctacaaggtgctggaaggattccacagaactctcaa
gacagcgttcgtcttctgaagaccctccagcccttactgcaggatgccatacagaacagt
cgagtaacaaggttgtgggaacacacttacaaactgtcaggtcctctcacctggaaagag
tttcaccagctggctggcagaggtgcagatgagaattcagctcctcagccgatcccttca
ttccttgttggttacgaccgagactggctctctgtctcaccacatgctttgcatttttgg
gataagcagttcctggaaccctatggtaaacctcgtgatattgcctatgtggtgttatct
ccggaaaatgattatattgtcaatgctgtgaagctgttcttcaaagagctcagcactgtg
tatggtatgtctaagatgggaaggcactgtccagcttccaaggttctccgtgatggcatt
atgagggtcggcaggaaggctgcagagactgtagtgaatgagtctgtggatgaatggttc
acacaaattggagattcacctgtagctgaaaaactgagactctacgcaaaagtttgcttg
catcgtttatcaccatatctgtcacaaaatatggacatgaagtctttgtttgaaccaacg
acaacacacagacctggctacaagacaccagactcttcagcacccatccctacgcctgcc
tcttctgttcccaacttgcaatcagatcactccacattcaatgtacctacatcacaggca
aactcctccgaggacaaagaaaattccactcaggagaatggggaaccacagaaggacatg
agttttggtagacaagacgatgaagacgaaaacacaaactgtccagcattggtcatttac
attgtcaatcccttcacctatggccatgagtgggatagcagtcttgacaggcttgtccac
acagggcttctcaaatgttatcaggcccttgtcaaaacactacctcctcaactacaacag
aatattaatctacagatggttccccttaagacaatcctggagaatactgaaaaaggtagt
aacacacagctgttgaagtccatgtcattttctgtgttcaatatgtgtggctggaaccta
gtacacacggttatgggcaggtcccttaccgggtttggtcctgctgctgcagccgaccgc
cttctcaagaaaaaagaggttgaaaagaaccgtttgtacagtcctccatttattctggcc
cccaccaaggacaagcaggccatactagctgagtcaacatgtggggagaagattgagaag
agtaatgtcctgttctgtgtgtactgtctgtcggaggaccagcgctggctgctgggcgtc
tgtactgacgaatgtggtgaactcatggagacttgtacaattaacatcgaaattcctaat
agaaatagacgtcggaaagcatctgcaaggaagataggtctgaagaaatactgggacttc
atacttggagttgtatcagttgtggctagcccttgtcgtctggttataagtcgatttggg
cggattggtcatggagaaatgaaaggttggtctggcctcctgagcaagaaaaacattatg
agggtaagcaagcaggtgaaggaatcttgtgtgcagtgttcccttctcagtagtacagac
gtacctggagtagttagcgcctgtcttgtctcccttgaagctcaaccctccttccatatc
atggctgacgctgttaaactggaggaaaagatgtcttctaagtgtcctctacagactcca
cgcgacacctctgtcactcacatactcgtcttcccaacctcggctaaagctcaggctaat
tccagtgcgagtgagccttcaggaggaatggacattgtcaatcataatttaatggaggat
aacatccttgagtgtttagaaacagatttcaatgctgacacagacgaggacttgtccttc
ctcaacttgtttgaatcactgaaaagtgaccccctccctaacatccctggatctccaact
ggaatggacactggtcatcacccttcaattggcatgaacgaccactcatctattggacag
aatatgtctggatcggatccccaggatgagcctacaaacctcctacagcagcccttggct
atggggtactacttatccacagcacgtcatggtccactcccacgctggttctggtcatct
gctcctgagaatgaaaaccacaccctctcctgcttcaaggctgcactccatgtacataat
tcacaaaaacatgacgacttcatgcagtcaacacagaataggaattctcatccattggac
tctggccttacttgtgatgtgctgaggtatgttttggagaacttcaactcgttgtcatgg
ttaacgtatgatgtggtggagaatgatcgtcagtcctgtctgcccatacactttgtagtg
ttgctacagatgtaccatgcattgaatgcatttgtgtga
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