Pecten maximus (king scallop): 117333592
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Entry
117333592 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor 8-like
KO
K12856
pre-mRNA-processing factor 8
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117333592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmax03041
]
117333592
Spliceosome [BR:
pmax03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117333592
Complex C
U5 SnRNP specific factors
117333592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
DUF536
Motif
Other DBs
NCBI-GeneID:
117333592
NCBI-ProteinID:
XP_033748841
LinkDB
All DBs
Position
8:43401986..43434998
Genome browser
AA seq
2359 aa
AA seq
DB search
MAFPYMIGPGGQPFIIQQIPMIPQPVLQTQPQQMPPPVAPPPQQPKVPDYMSEDRLQEKA
RKWQQLQSKRYSEKRKFGFIDAQKEDTPAEIVRKIIRDHGDMTNRKFRHDKRVYLGALKY
MPHAVLKLMENMPMPWEQIRDVHVLFHITGAITFVNEIPWVIEPVYIAQWGSMWIMMRRE
KRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQMELDSDEDKPVMEWFYDHKPLT
ESKSVNGTTYRRWGLTLPVMSVLYRLANQLLTDLVDDNYFYLFDLKSFFTAKALNMAIPG
GPKFEPLVKDKELQDEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNSMPYKVHLSWYHTP
NVVYIKTEDPDLPAFYFDPLINPISHRHTVKSEVLPDDEEEFELPDYVQPFMQETPLYSD
NTANGIALLWAPRPFNLRSGRTRRAMDIPLVKAWYREHCPSGMPVKVRVSYQKLLKYFVL
NALKHKPPKAQKKRYLFRSFKATKFFETTQLDWVEVGLQVCRQGYNMLNLLIHRKNLNYL
HLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLGNVDAFQLSD
GQQYVFAHVGQLTGMYRYKYKLMRQIRMCKDIKHVVYYRFNTGPVGKGPGCGIWAPGWRV
WLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDM
MPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKAKADWWTNTAHY
NRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHW
LESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHE
ALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEADKRRLF
PPWIKPADSEPPPLLTYKWCQGINNLQDVWDTSEGECNVMMESHYEKMYEKIDLTLLNRL
LRLIVDHNIADYMTAKNNVVINYKDMNHTNAYGIIRGLQFASFIVQYYGLVLDLLVLGLH
RASEMAGPPQLPNDFLTFQDVNTESAHPIRLYSRYIDRIHIFFRFSAEEARDLIQRYLTE
HPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLPRSVTTILWDNSFVS
VYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEVTKERTAQCFLRVDDES
MSRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQ
TRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSG
MSHDEDQLIPNLYRYVMPWESEFIDSQRVWAEYTLKRQEANAQNRRLTLEDLEDSWDRGI
PRINTLFQKDRHTLAYDKGWRVRTEFKAFQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQ
ALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTL
WWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQV
FDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNMSKPSLLADSKDVMDNTT
TQKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLVGIDLAYNLHSAYG
NWFPGCKPLIQSAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQI
IWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQL
AKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQAC
LKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRTKIVLKP
DKTTITEQHHIWPTLSDEEWMKIEMQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEI
SAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETSTFASKTEWRVR
AISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFIIISDLRAQIAGYLYGVSPPDN
PQVKEIRCIVLPPQWGTHQTVHLPNILPESEYLKEMEPLGWIHTQPNELPQLSPQDITTH
AKVMADNPAWDGEKTVIITCSFTPGSCSLTAYKLTPTGCEWGRQNTDTGNNPKGYLPSHY
ERVQMLLSDRFLGFFMTPSQSSWNYNFMGVRHDPNMKYELQLSNPKEFYHEVHRPSHFLN
FSSMEEGELGSSDREDLYM
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcccatacatgatagggcctgggggtcaacccttcatcattcagcagatacca
atgatcccccagccagtattacagacacagcctcaacagatgccccctcctgtggctcct
ccccctcagcagcctaaagtgcctgactatatgtcagaggaccgcttacaggagaaagct
cgtaagtggcaacaactgcagtccaagcgctacagtgaaaagaggaaatttggattcatt
gatgcacaaaaggaagacacgccagcggaaattgtccgaaaaattatccgagaccatggt
gacatgactaacagaaagttccgacatgacaagagagtttatcttggagctctgaaatac
atgccacatgctgtccttaaactgatggagaatatgcccatgccatgggaacagattcgg
gatgtccatgtgttgtttcacatcactggtgccattacctttgtgaacgagataccctgg
gtcattgaacctgtgtatatagcacagtggggatcaatgtggatcatgatgcgccgagag
aagagagatcgtcgtcacttcaaaagaatgcgtttcccaccatttgatgatgaagagccg
ccactggactatgcagacaacatccttgatgtagagcccttggaagccatccagatggag
ctggactcggacgaagataaaccagttatggaatggttctacgaccacaaaccactaaca
gaatcaaaaagtgtgaacggcactacctaccgtcgctggggacttaccttgcctgtgatg
tcagtactgtaccgtctggccaatcagcttctcacagatctagtcgatgacaactacttc
tacctgtttgatctcaagtccttcttcaccgccaaggcacttaacatggccattcctgga
ggacccaagtttgaacccctcgttaaggacaaggaactacaggatgaagattggaacgag
ttcaatgacatcaataagataattattcgacagcctatcaggacagaataccgcattgct
ttcccatacctgtacaacagtatgccatacaaagtacatctttcatggtaccacacccca
aatgttgtctacatcaagactgaggatcctgatctgccagcgttctactttgatcctctc
atcaatcccatttctcacagacacactgtaaagtcggaggttcttccggacgatgaggag
gaatttgaactgccagactatgtccagccgttcatgcaagagacccccctatactctgat
aacacagccaatggcattgccctgttgtgggctcctcgacctttcaacctgaggtcaggt
cgtacacgtcgtgctatggacattcctctggtcaaagcttggtacagagaacactgtccg
tcaggcatgcctgtcaaggtgcgagtgtcgtatcaaaaacttctcaagtactttgtcttg
aatgccctcaaacacaagccacctaaggcccagaagaagaggtacctgttccggtcattc
aaggcgaccaagtttttcgaaacaacccagctggactgggtggaggtaggattacaagtg
tgtcgccaaggctacaacatgttgaacctcctcatccatcgcaagaacctcaactatctt
catcttgactacaacttcaacctgaaacctgtcaagaccctcactaccaaggaaaggaag
aagtcccgatttggaaatgctttccatctgtgtcgtgagattctgcgtctgaccaaactg
atcgtggacagccatgtgcagtatcgccttggaaacgtggatgccttccagctttcagat
ggccagcagtatgtgtttgcccacgtaggccagctgactggtatgtacagatacaagtac
aaactgatgagacaaatccggatgtgtaaggacatcaaacatgtcgtctactacaggttt
aacacaggaccagttggtaagggtcctggctgtggtatctgggccccaggctggagggtg
tggctgttcttcatgcgtggcatcacacccttgttggaacgttggcttggcaacttgctg
tctcgtcagtttgaaggacgacattccaagggagtggccaagaccgtcaccaaacagaga
gttgaaagtcactttgatctggaactcagggcagctgtgatgcacgacatcctggacatg
atgcccgaggggatcaaacagaacaaagcaaggactatcctacagcacctgagtgaggcc
tggagatgctggaaggctaacatcccctggaaggtgcctggcttgccaatccccattgag
aacatgattttgcggtatgtgaaggccaaggcagactggtggacaaacactgcccattac
aacagggaacgaatcaggagaggtgccacagtggacaagactgtgtgtaagaagaacctg
ggtcgcctcacacgtctgtacctgaaggcagaacaggagaggcagcacaactacctgaag
gatggtccctacatcacagctgaggaagctgtcgccatctacaccacaactgtccactgg
ctcgagagtcgacgattctctcccatcccattccctcctctctcttacaaacacgacacc
aagcttctcattctggcattggagaggctgaaggaagcatacagtgtgaagagtcgacta
aaccagtcacagagagaagaactgggacttatagaacaggcgtacgacaatcctcacgag
gctctgtctcgtatcaaacgtcacctgctcacacagagagcctttaaggaggtgggtatt
gagtttatggacctatacagccatctgatccccgtgtatgatgttgagcccctggagaag
attacagatgcctacctagaccagtatctgtggtacgaggctgacaaacgacgcctgttc
ccaccctggataaaacctgcggactccgagccgcctcctctccttacttacaagtggtgt
cagggcatcaacaacttacaggatgtgtgggacaccagtgaaggggagtgtaatgtcatg
atggagtctcactacgagaagatgtatgaaaagattgatcttacacttctcaacagattg
ttacgtctcatcgtcgatcacaacatcgccgattacatgacagctaaaaacaacgtcgtc
ataaattataaggacatgaaccatactaatgcttatgggataatccgaggactccagttt
gcttcgtttatagtacagtactatggcctggtactagaccttttagtattgggcctacat
cgtgccagtgagatggctggtccaccacagctgcctaacgactttctcaccttccaggat
gtgaatacagagtcagcccatcccatacgtctgtactcgcgttacatcgaccgcatacat
atattcttccgattttctgcggaagaggccagagacctgatccagcgatatcttacagaa
catcctgatcctaacaatgaaaacatcgtgggctacaacaacaaaaaatgctggcctcga
gactccagaatgaggctcatgaagcacgatgtcaacttgggacgtgctgtcttctgggac
atcaagaaccgtttgccgagatctgtgacaaccattctgtgggacaatagcttcgtgtcg
gtgtacagcaaagacaatcccaacctactattcaacatgtctgggtttgagtgtcgtatc
ctgcctaagtgtcgtaccacacacgaggaattcacacacagggacggcgtctggaacctt
cagaatgaggtaaccaaagagaggacagctcagtgtttcctgcgagtggacgatgagtcg
atgtcacgattccacaaccgtgtacgtcagatcctcatggcatcgggatcgacaacattc
acaaagattgtcaacaaatggaacaccgctcttattggtttaatgacatatttccgtgag
gctgttgtcaacacacaagaactattggaccttcttgtcaagtgtgaaaacaaaatccag
acccgtattaagatcggactcaattctaaaatgcccagtcgtttccctccagtggtattt
tacacccctaaagagttgggtggactcggaatgttgtcaatgggccacgttcttatccca
cagtcagatctccggtggtcaaaacagacagatgttggtatcactcatttccggtctggt
atgagtcacgatgaagatcagctcattcctaatttatacagatatgtgatgccctgggag
agtgagtttattgactcacagcgagtatgggcagagtacacgctgaagcgacaggaggcc
aatgcacagaacagacgtttaacactagaggacttggaagacagctgggaccgtggaatt
cccagaatcaacacattgttccagaaagacagacacacacttgcctacgacaagggctgg
cgtgttcgaacagagttcaaagccttccaggtactgaaacaaaatccattctggtggaca
catcagcgacatgacggcaagttgtggaacctgaacaattaccgcacagacatgatccag
gcacttggtggcgtggagggaatcctggagcacactctcttcaaggggacatacttccca
acatgggaaggtctcttctgggagaaggccagtggatttgaagagtctatgaagtacaag
aaattgaccaatgctcagaggtctggtctcaaccagatcccgaaccgtcgcttcacactg
tggtggtcaccaaccatcaacagggccaatgtatatgtaggtttccaggtacagttagac
ctgacaggtatcttcatgcacggcaaaatcccgaccctaaagatctcgctgatccagatc
ttccgtgctcacttgtggcagaagatccatgagagcgttgtcatggatctttgtcaggtt
tttgaccaggagctggatgccctggagatagagacagtacagaaagagacgatacatcca
cggaagtcgtacaagatgaacagttcgtgtgctgatatcctcctgtttgctgcttacaag
tggaatatgtccaaaccatcactcctggcagactccaaagatgtgatggacaacaccact
acccagaaatactggctggacatacagctccgttggggcgactacgactcacatgacata
gagcgctacgcccgagctaagttcctcgactacaccacagacaacatgagtatctatcca
tctccgacaggtttactggtcggcatcgatctggcttacaacctgcacagtgcatacggt
aactggttccctggctgtaagcctctgatccaatcagctatggctaagataatgaaggcc
aacccagctttgtatgtgctgagggagcgcatcaggaaggggctgcaactctactcctcg
gagcccactgagccttatctgtcctcacagaactacggcgagctcttctccaatcagatt
atctggtttgtggatgacaccaatgtctacagggtcaccattcataagacttttgaggga
aatcttacaaccaagcccatcaatggtgccattttcatcttcaatcctcgtaccggtcaa
cttttcctcaagatcattcacacctccgtgtgggcaggacagaaacgtctcggacagttg
gccaaatggaagacagctgaggaagtggcagccttgattcgttccctccctgtggaggaa
cagcccaaacagattattgttacaaggaagggtatgctcgaccccctcgaggtgcatctc
ctcgacttccctaacatcgtcatcaagggtagtgaactccaacttcccttccaggcctgt
ctcaaagtggagaagtttggtgaccttatcctgaaggctacagaaccacagatggtgttg
tttaacctgtacgatgactggctcaagacgatatcatcctacacagcattctctcgtctc
atcttgatcctccgagcattgcacgtcaacaatgaccggacaaagatcgtcctaaagcct
gacaagacaacaatcacagagcagcatcacatctggcccacgctgtcggacgaggagtgg
atgaagatcgaaatgcagcttaaggatcttatcctggccgactatggcaagaaaaacaac
gtcaatgttgcatcccttacacagtcagaaatccgtgacatcattcttggtatggagatc
tcggccccgtcagcacagcgtcaacaaattgcagagattgagaaacaaaccaaagaacaa
tctcagctcacagcaacaacgacgcgaactgttaacaaacacggagacgaaatcatcacc
tcgacaaccagtaactacgagacttctacctttgcatccaagacagagtggcgagtcaga
gccatttccgcaacaaacttgcatctgcgtacaaaccacatctacgtttcgtcagatgac
atcaaagagacgggttacacatacatcttaccaaagaacgtgctgaaaaaattcatcatt
atctcggatcttagagctcagattgctggctacctgtacggagttagcccccctgacaac
ccacaggtgaaggagatacgttgtattgtgttacctccacagtggggaactcaccagacc
gtccatctacctaacatcctcccggagtccgagtacctcaaggaaatggaacccctgggt
tggatccacacacagcctaacgaactgccacagctgtcccctcaggacatcacaacacac
gccaaggtgatggccgacaaccctgcctgggatggggagaagacggtcatcatcacatgt
agcttcacgcctggctcctgttcactgaccgcttacaaactgacccccacaggatgtgaa
tggggccgtcagaacacagatacaggaaataaccccaagggttacctcccctcccactac
gaacgtgtacagatgttattgtccgatagattcctgggattcttcatgacaccatcacag
agctcctggaattacaactttatgggtgtgcgtcatgaccccaacatgaagtatgaacta
cagctatcaaacccaaaggagttctaccacgaggttcatcgtccttcccacttcctcaat
ttctcctccatggaagaaggagaacttggcagttcagacagggaggatctgtacatgtga
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integrated database retrieval system
