Pecten maximus (king scallop): 117333617
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Entry
117333617 CDS
T07399
Name
(RefSeq) nucleoporin GLE1-like isoform X1
KO
K18723
nucleoporin GLE1
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
pmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117333617
03015 mRNA surveillance pathway
117333617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117333617
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117333617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
117333617
NCBI-ProteinID:
XP_033748889
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All DBs
Position
8:44008471..44040408
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AA seq
696 aa
AA seq
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MSTLGNSDIVVSLKSTSKGRLVYDRSRHVTKKFLDECSSPPELSRLHDESKYKYVNPNYQ
REKQQQQQEKRDEEKQERSEESYDFGEDSGPLELEKLQISPRKPALVVSPDFVRSVKAIK
DYEHVYDNRVKDALAKKANEFQTHSNQLQQKTEKQLKDLERKNILKALQVQETTLQQHKK
GKDESAKVYLKMQEDHRKHAQMLEQKHDKIQDEIRKKEQEKKEREEKLKQMFTDLKTVQS
RILAIQPNCSIQNKLSEQCKMIVERIRKTTTDLENHIMQESQSGERNESLPDKLKEAVMF
ALNAYEAISKRIEEEKQKLEEEKAKVAAAVAAEAEAKRLEEQAKAAAAASAQATLSEDKN
KPAAGPVPLAENEIQCVDLDAFQWYTKLQEDMKKTEELIKPLSNPESKKLKFDLQKAVNT
PINAISPISGEHLREKLKRLLDLMSGQSVEVGSKRVNVGDHPQALTFCKHLVAKMVVKKG
DEQVSSKHETAFPTAMVFVGLWMEHPDIGNLFLSHLHRACPYTVPYYIPRQEGQSTEDYH
RTLGYRYNSDGSVEKQDQFLKRMSGMMRLYAAIMVAPPPPLRGANNTHPHGVENAWIWLS
RVMNIHPHPDITATMIYDMLHVTGNALNARYGKQFQKLLYMLIKEYLPKLKQVASASGGG
PLTRLETFLETCLKNNRQVMIPNPDGFLQAEFWRSS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactttaggaaacagcgatattgttgtatccctcaaaagtacatcaaaaggccgt
cttgtttatgatagaagtcggcatgtgacgaagaaatttttagatgagtgctcttctcca
ccagagttatctcgtttgcatgatgagtccaaatacaaatatgtaaatccaaattatcaa
cgagaaaaacaacagcaacaacaagaaaagagagatgaagagaaacaagaaaggagtgaa
gaatcttatgatttcggtgaggactccggaccactggagctggagaaacttcaaatctca
ccacgaaagcctgccttggttgtgtccccggacttcgtcaggagtgtgaaggctataaaa
gattacgaacatgtgtatgataacagggtcaaggatgcattggcaaaaaaggcaaatgag
tttcaaacacatagtaatcaactgcaacagaaaacggagaaacagctgaaggatctggag
cgtaaaaatatccttaaggctctacaggtgcaggagaccacacttcaacagcataaaaaa
gggaaagatgaatctgccaaagtatatctaaaaatgcaggaagaccacaggaaacatgct
cagatgttggaacaaaaacatgataagattcaagatgaaatacggaaaaaagaacaagaa
aagaaggagagagaagagaaattaaaacagatgtttacagacctcaaaactgtacagagt
cgaatactcgccatacagccaaactgttctatacagaacaagctctcggagcagtgtaaa
atgattgtggagagaatccgtaaaacgaccacagatctagagaaccacatcatgcaggag
tcccagtcaggagagagaaacgaaagtttacctgataaactcaaggaggctgtcatgttt
gctctgaatgcttatgaagctatatcaaagagaatagaggaagaaaaacaaaagctagag
gaggagaaagcaaaggtggcagcggcagtggctgctgaagctgaggctaaaagattagag
gaacaggccaaggcagcagctgcagcatcagcacaagccacattgtctgaagacaaaaac
aagccagctgctggaccagtaccgttggcagagaatgaaattcagtgtgtagatctagat
gccttccaatggtacactaagctacaagaggatatgaaaaagacagaggagctcataaag
cctctgtctaaccctgagtccaagaagttgaagtttgacctacagaaggccgttaacaca
ccaatcaatgccatatctccgatcagcggtgagcacctgagagagaaactgaagcggcta
ctggatttgatgtcgggccagtctgttgaagtgggcagtaaaagagttaacgttggcgac
catcctcaggctctcacattctgtaaacatctcgtcgctaagatggtggtgaaaaaagga
gatgaacaagtatcctcaaagcacgagacggcttttcccacggcgatggtatttgttggt
ttatggatggaacacccagacattggtaacctgttcctgagtcatttacaccgcgcctgt
ccctacaccgtcccatactacatcccccgacaggagggtcagtctaccgaggactaccac
aggaccttgggatacaggtacaactctgacggaagtgtggagaaacaagaccagttcctg
aagaggatgtctggtatgatgcgactgtatgcagctatcatggtggcgccacccccacca
ctgaggggagcaaacaacactcatccgcatggagtagaaaatgcctggatttggctttca
cgtgtgatgaatattcatcctcatccagacattacagcgaccatgatttacgacatgttg
catgtgacaggaaacgctctaaatgctagatatgggaaacagttccaaaaactcttatac
atgctgatcaaagaatatttacccaaactaaaacaggttgcttcagcgtctggcggagga
ccactgactcgactagagacattccttgaaacgtgtctcaagaataacagacaggttatg
atacccaatccagatggattcttacaagcagagttctggcgctcttcttga
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