Pecten maximus (king scallop): 117334146
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Entry
117334146 CDS
T07399
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmax03016
]
117334146
Transfer RNA biogenesis [BR:
pmax03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
117334146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Bap31_Bap29_C
nec1
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
117334146
NCBI-ProteinID:
XP_033749503
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Position
9:22055328..22090174
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AA seq
1353 aa
AA seq
DB search
MRNLELLNLIELTPLSELCGTQCTSIDCDTGIVYSATSTHLVGLDPNSGELTGIVSLVEE
AFVPADGTGCVVGIQYLADQQAVCAATSSGNLVLWHVTMGQLECVGSVDSGLTSMTWSPD
LELLILTTGQNTFIMMTREFDPITESSLHPENFGEAQFVTVGWGKKETQFHGSAGKEAAK
QKLEDVKPALPWDDRLPRVSWRGDGQLFVVSTISPDTGARKLRVWNRECEHQSTSENVDG
VEQALAWRPSGNLIASTMRRPNKHEVIFFEKNGLRHGEFTLPFGVNDVQVTELCWNLDSS
VLMVRLKDLVKDTGGQTIPRTYVQLWTMNNYHWYLKQSLHFDGTAEDKIVSVVWDPEHAY
RLHIMCSGGKYLQYTWSWATNYSSGISNDNQALVAVIDGDRVLLTPMRDMVTPPPMSAYY
LQLPCPVNHVAFCLQGNPNDMALVLVDGRVAVYTFAREPVDKDLQRDSTIKFDVTLGEGF
TLCCQTPRLQGIYRIEGLPLDTQKVPIAMQHFVWLNSELLMFCTQDLSHGQNSVLHCADL
KLDKDKPHLTVKTSIDIESFVYKMAVNSETGSVAIQLCNGCMLKFDSGCDIVLPWEMRSG
SELTFPVPCPYMCICDIGGEEVVIGLTDRYRLYVNDTEVASNCTSLAVHSEYLLLTTLTH
TCRCISRHTKVQVLPTLSDGKAHPFDESVRRVERGSRIVCVVQNETKLVLQMPRGNLETI
HPRALVLSAVRKYLDSLEFGKAFVCMRKHRLNLNLIYDHCPQSFLDNVQKFVQQVALVDH
INLFLTDLREEDCTVTMYTAAYNRSASVGDEGTDQPSKVDKVCDVVREALISLDEKKYLL
SILTSYVRKSTPELEAALLMVKTLRAKPSDQQTMSAEEVLKYLVFLVDVNEMFDVALGTY
DFDLVLMVAEKSQKDPKEYIPFLNQLRKLSGHFQLYTIDEHLKRYSKALVHISKCGPEHF
ETCKTSIQKHKLYTEALQLFPVSSDEHKSIAKIYGDYLSDKRRHLDAGIMYIKAEEWEMA
LQDFRTCLQWRQVFCMTARLKYSSDTEADIARKLAEQLKMKKLHLDAAHVLEQYAKDTEE
AIVCLIDGCLWEEALRLMYKYSRTDFIETNLMGALTENYSQQMELLDTSKLEFEKYKKRL
AVVREEKEKARLEFLESGGTGNMADADLFSDTSSATGESIQSSRYSSESGRSGRSSLYSR
SSGSSAKNRRKAEHKKWKLKEGSQYEDFALIAALAKLIKMVDDLREETNGLLRALLQFHH
DKQATDLQRAYDRLLTQMERGIPEIWQDGDDERESQPMLGPLTTANSIAQAVQRGQSLTH
SQEKLDPVIRIPPNLRKEISWKLHVLDSGSAKT
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatctcgagctgttgaacctgattgagttaactcctttgagtgaattatgtgga
acacagtgcacaagtatagactgtgacactgggattgtttactctgctacatccacacat
ttggttggacttgaccctaacagtggagagttgacaggaatagtctcccttgttgaggaa
gcatttgtaccagcagatggcactggttgtgttgtgggtatacagtacctggctgaccag
caggctgtgtgtgctgcaaccagtagtggcaacctggtgttgtggcatgtcaccatggga
cagctggaatgtgttggatcggtagatagtggtttgacctccatgacctggagccctgac
cttgaacttctcatactcacaacaggacaaaatactttcattatgatgaccagagagttt
gatcctatcacagagagctctctccacccagagaattttggagaagcccagtttgtcaca
gtgggatggggtaagaaggaaacacagttccatggttcagcaggcaaagaggcagccaaa
caaaaactagaggatgtgaaacctgcattgccatgggatgaccgattacctagggtcagt
tggcgaggggatggtcagctttttgtggtcagcaccattagcccagacacaggagctcgc
aaactacgagtttggaatagagaatgtgagcaccagtccaccagtgaaaatgttgatgga
gtggaacaagcgttggcatggaggccatcaggtaatctgatagccagcacaatgagaaga
ccaaacaaacacgaagtgatcttttttgagaagaatggactgagacatggagagtttaca
cttccttttggtgtcaatgacgtacaggtgacggagttatgctggaatctggactcgtct
gtactgatggtgagactgaaggatctagtgaaggacacaggtggtcagactatacctcga
acatatgttcagctttggactatgaataactatcactggtacttgaaacaaagtctgcac
tttgatggcacagcagaggataaaatagtgtcagttgtttgggaccctgaacatgcatat
cgcctccacataatgtgttctggagggaaatatctacaatatacatggtcctgggccacc
aactacagttcagggatatccaatgacaaccaagcattagttgctgtaattgatggagac
cgagtgttgctgacccctatgagagatatggtgactccccctccaatgtctgcctactac
ctacaactcccgtgtcctgtcaaccatgtggccttttgtctccagggcaacccaaatgac
atggcattggttttggtggacggcagagtggctgtctacacatttgctcgagaacctgtt
gataaggacttacaaagggacagtacaatcaagtttgatgtcacattaggcgagggattc
acgttgtgctgtcaaactccacgtttacagggaatctacaggattgaaggcctgccattg
gacacacagaaagtaccaatagccatgcagcacttcgtttggttgaactctgaacttttg
atgttctgtacccaggatctgagtcatggccagaactctgtgcttcattgtgctgatcta
aaactcgacaaagataaaccccacctcactgtcaagaccagtattgacattgagagtttt
gtatacaagatggccgtcaattctgaaactgggtccgtagccatacaactgtgcaatggt
tgcatgctcaagtttgattcaggttgtgacattgtgttgccgtgggagatgaggtcaggg
tcagagttgacctttcctgtgccctgtccttacatgtgtatctgtgatattggaggggag
gaggtggttatagggctgacagacaggtacagactgtatgttaatgatacagaggttgca
tctaactgtacgtcactggctgtacacagtgaatacctccttctgacaaccctgactcac
acctgtcgctgtatcagtaggcacacaaaggttcaagttctgcctacgctgtcggacgga
aaggctcacccgtttgatgagagtgtacgccgggtggagagagggtctagaatcgtttgt
gtagttcagaatgaaaccaagctagtcttacagatgcctcgtggtaacctagagacaatc
cacccccgggcacttgtgttgtccgcagtcaggaaatacctggacagtctggagtttggt
aaagctttcgtgtgtatgaggaagcatcgactcaacctgaaccttatatatgatcactgt
cctcaaagtttccttgacaatgttcaaaagtttgtccagcaagtcgcacttgtcgatcac
atcaacctcttcctcacagatctcagggaggaagattgtacggtgactatgtatactgcg
gcctacaaccggtcagcttctgtcggagacgagggcactgaccaacccagtaaagtggac
aaagtttgtgatgtagtccgagaagcacttatcagtttggacgaaaagaagtacttactt
tccatactgacatcttatgtacggaagagtacaccagagctagaggctgccctgttaatg
gtgaagacactccgagccaagccaagtgaccagcagaccatgtcagcagaggaagtatta
aaatacctggtcttcctcgtggacgtcaatgagatgtttgatgttgccttgggaacatac
gactttgacctggttctgatggttgctgagaagtcacagaaggatccaaaggaatatatt
cccttcctgaaccagcttcgtaagcttagcggtcacttccaactctacacgatagacgaa
cacctgaagcggtacagcaaggccttggtacacatcagtaaatgtggaccggagcacttt
gagacttgtaagacatcgatacagaaacacaagctttatactgaggccctacaactgttc
ccagtgtcttctgatgaacacaagagtattgcgaaaatatatggcgactatttatctgac
aaacgtcgccatctagatgcaggaataatgtatattaaggcggaagaatgggagatggcc
ctccaggactttcggacgtgtctacagtggcgtcaagtcttttgtatgaccgctagactc
aagtacagttcagatacagaggctgacattgctcgcaaacttgcagaacaattgaagatg
aagaaactgcatctggatgccgcccatgtcttagaacaatacgcaaaggatacagaggag
gccattgtctgccttatagatggctgtctgtgggaggaagctcttaggctgatgtacaaa
tacagtcgtacagacttcatcgagacaaacctgatgggggcccttacagaaaactacagt
caacagatggagttgctggatacttccaagttagaatttgaaaaatacaaaaaacgtcta
gccgtagtcagagaggagaaggaaaaagctcgtctagaattccttgaaagtggagggact
ggaaacatggcggatgccgatttgttttctgacacaagtagtgctacaggggagagcatc
caatcatcccgatattcctcagagtccggacgctctggacggtcttctctttacagtaga
tcatcaggatcatctgccaaaaaccggcggaaggcagaacataaaaaatggaagctcaag
gagggtagccagtatgaagattttgctctcattgctgcacttgcaaaactcatcaaaatg
gttgacgatttgagagaggagacgaatggtctactacgtgccctactacagttccaccat
gacaagcaggcaactgacctacagcgggcttatgaccgtctccttacccagatggagaga
ggaatcccagaaatctggcaggatggtgacgatgagcgggagtctcagccaatgcttggt
ccgttgacgacagccaatagtatagcacaggcagtacagcgtggtcagtctttgacgcat
tcccaggaaaaacttgatccagttatccggatacctccaaatctacgtaaagagatcagt
tggaaactccatgtgttggactcaggttcagccaaaacgtga
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