Pecten maximus (king scallop): 117335085
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Entry
117335085 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: focadhesin-like
KO
K27498
focadhesin
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117335085
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117335085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
117335085
NCBI-ProteinID:
XP_033750896
LinkDB
All DBs
Position
9:44063340..44456552
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AA seq
1787 aa
AA seq
DB search
MEDVKKRLAFGNIGVQTQAIWRLYNEVTKKTATLGRIDSKTPEFVEIKLLWEKCGDEITI
LAKSACQVLVRLVTDNNADFLFILNGLLNQVPSARSLLGIVNGISELLVLQIALAENQGQ
PYSCPYRLRTPPHPFITVLTNRPEAWPLLQHQVYCLCCHGNRSVRRNAMEMLATFLKFVL
LEPQQSTQYQPMKTSLERTLMQVLGQSQHQESAKGILGFLMKILPYYQICESRDLAQTSQ
FVTEIVLKCLGYPGVDKCQTELRILAEFGLSLHHQGTLKGQGVTSLMDALRKVASSFPEV
MATDQNLITMATTLLSCSIDQVLSLLILCKQVLETDSSDISPVGARMLILPMLQILATPR
SELIGRQLGILHSLAGDIILNIEKGRAVSNEMTLQRDRRVGMTTASYEDQNFVNWTTVFS
IQSDQAVSWMDSLMSSLKLTNCIPFSLTNLVSALFTMSRSEEEASLALKTLTLIANQDST
QAPWFLPLMLYQLRRESTPSVRFEIMMTIPKLATHKVCVGPILRTIQSFGTFPAMRGLYL
QMLTDLWKIQDRCFPQLLMETNKGSSDSLEVLLSKAKAIRDVCKLRPEQHGSDMLVPLSD
ILSQCTREEEAAVSSLALEGLYFLCEAEVINILSAWSVLADSLVRDSRPAVVVKICELFS
LVPSLVEETAEYEKFCEDAVMNLWLYTTSDNAKVCGAAFQALAMYRADQFKVSYLPQHVT
EDLGNKQNRCPCEEERDISVDDMFPLVPGLCYTRLLKTLPTQVLPDYKAFLAAMVAKEVN
DLPRGIYHSSLWRQSAATNQSKAIGSIPAFIIGQYNKTKQPGLRPGLAVSTLFCYDPPLE
VGRDGRPRKHYVITHSKNFQQMLKTLLNEVPIQPSEWHRSMVIPQAWTSFIDRAFTAMIE
GRRAEIDLQLKRDHVSEDEARLKKQVAWLWVRDTLVDVIKINSRGNPTMQSNSIYALAGL
AVTANRYGNGLDTEAAKAAEESTEFMSPSHWLTVVIDTIMSLMDVNFTPKGHLIGLCQQR
SVDNRLPASVLAQASASVALSQVVPALITLDVDRIYTTINFLLTWLPGQPNVPESPVLQF
HGGLGLGMFLSRLLEEHFADISGTKGMLQIWRSFDKLEECSLAKGIENRSGAILGLGMAV
CAMCEEGKTESRAHVVSIYDKLLALYDDLDPLDNIVQSVSVCTACIAGAAFSSNILSVTR
VDTAVDKLMTTHSNHPQVTGVCLALGMLCYSLRRAGHPGVGDVRTRLCGSWIRTLSAEDT
APMEKVAILNGLMALIGSERTLIPVQSSAVSSDLNTDDVIKVASQTVASGNDLGIQNNAA
WMLGHLYLSACAVADTRASVPSTYGYLPEKSFLRAVVDFMAEAGKAGAETVPKEQVELAL
TSLQEEVEQALPPINWAGLLTPMMRMGFGDEVRRLSLKLAVKQSGTAPTAALFLTTWMTL
PLLSTLDERCQMVLYDALPVLICSIAPTAIGSLLDVGSSQTYISPDGILNHGLLHVLTGL
TNALKVNDPPEAVTAVLYKAVGTLYTKLASSTQVSVLCVLADCLGSLPDDLFDKITGEDF
LYDTSHSNGCLVRCYLVAQGKQPIAILNSCIDATFNNKRCNRSLLSKYLQHCFYQMTKTR
SEFTGVMQRLQWLVELLGHVRNIATGTTTLSDDITSKTEVMDLAVDVIAAVLCLWMSTSS
ACVLGIMPQFLTCPDTSFSPDSRSTWKPSILPRQILPAYITSIQSEPWDHILPKVVDCMT
TLLSQPDDVISSRTRRSLQGSLQILRHSTAFRKPMVWTEIYDAVLVK
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgtgaagaagaggttggcatttggtaacataggtgtacagactcaggcaatt
tggagactttataatgaagttacgaagaaaacagctacacttggacgaatagactccaag
actcctgagtttgtagagatcaaacttctgtgggaaaaatgtggtgacgagattactatc
ctagctaagtcagcctgtcaagtgttggtccgtttggtaactgacaacaacgctgacttc
ttgtttattctcaacgggctcctgaaccaagttccatctgccaggtcccttttgggaatt
gtgaacggaatcagcgaactactggtcctacaaattgcgcttgcagaaaatcagggtcag
ccgtactcttgtccatatcgtttaaggacaccccctcatcccttcatcacagttttaacc
aaccgaccagaagcatggcctctactacagcaccaggtgtactgcctctgttgtcatggc
aacagaagtgtacgacggaatgcgatggagatgctggccaccttcctgaaatttgtactg
ttggaaccgcaacaaagcacccaatatcaaccaatgaaaacaagtctagagagaacccta
atgcaagtgcttggccaatcacaacatcaggaatctgccaagggaattctgggtttcctt
atgaaaatcctgccgtattatcagatttgtgaatctcgcgacctcgcccagaccagccag
tttgtgacggagatagtactgaaatgcttaggttatcccggagttgataaatgtcaaaca
gagttacggatcttagcagagtttggtttatctcttcaccaccaggggacgctaaaaggc
caaggagtcacatcattgatggacgctctgaggaaagtggcatcttcttttccagaggtt
atggctactgaccaaaatttgatcactatggcaaccacacttctttcctgctccattgat
caggtgctgtccctgctcattctctgtaagcaggtcctggagacagatagcagtgatatc
agtccagtgggagccaggatgttgatactgcccatgctccagattctggccacacccagg
tctgagttgattggtcgacagctgggtatccttcacagcttggcaggggacatcattcta
aacattgagaagggaagagccgtttctaatgaaatgacactacagcgagacaggagggtt
gggatgaccacagctagttatgaggatcaaaactttgtcaactggacaacagtcttctca
attcagtccgatcaagctgtgtcgtggatggacagtctgatgtcatcactaaaactgacc
aattgcatcccattttcattgacgaacctagtttctgcattgtttaccatgagcaggagt
gaagaggaggccagtctggcccttaagacgttgaccctgatagccaatcaagacagcact
caggctccttggtttcttcctctgatgctgtaccagttaagaagggagagcactccgtct
gtccgatttgaaatcatgatgaccataccaaagcttgctacacacaaggtgtgtgttgga
cctatcctgagaaccattcagtcctttggtacttttccggctatgaggggcctttacctg
cagatgttaacagatttatggaagatccaggaccggtgttttccacagttgctaatggaa
acaaataaaggatcctctgattctctggaagtgttactttccaaggccaaggccatcaga
gatgtatgcaaattaagaccagaacaacatggctcagatatgctcgttccgttatcggac
atcctcagccagtgtacgagagaggaggaggctgcggtgtcctccctagctctagaagga
ttgtacttcctgtgtgaagcagaggttattaacatcctgtctgcctggtccgtgcttgct
gacagtcttgtccgggattctcgacctgctgtggttgtaaaaatctgtgaactgttttcc
ctcgtcccatcattggtagaagagacagcagaatatgagaaattctgtgaagatgctgtg
atgaacttgtggttgtatacgactagtgacaatgcaaaagtctgcggggctgcattccag
gcccttgccatgtacagagcagatcagttcaaggtgtcctaccttccccaacatgtgaca
gaagatttgggcaacaagcagaacagatgtccctgtgaagaggaacgcgatatatctgta
gatgacatgttcccgttagtaccaggcctatgttatacaagacttttgaagactctgcct
acccaagtcctgccagattacaaagcatttttggctgccatggttgcaaaagaagtcaat
gacttaccaagaggaatataccactcatcgctatggagacagagtgctgcaaccaatcag
agcaaagctatcggatctatcccagcattcattattggtcaatataataagaccaaacag
cctggcttgaggccaggtttggcagtgagcacacttttctgctatgatccgccactggaa
gtaggcagggatggtcgtccacgaaaacattatgttatcactcacagtaaaaacttccaa
cagatgttaaagactctgttaaatgaggtccctatccagccatcagaatggcacaggagt
atggtaatcccccaggcctggacctcgtttatagacagagccttcacagccatgatagag
ggccgaagggcagagatcgacctccaactgaagagagaccatgtgtcggaggatgaagcc
agactaaaaaagcaggtggcatggttatgggttcgagataccttggtggatgttatcaag
atcaactccagaggaaatcccaccatgcagagcaactccatatatgcacttgcaggattg
gccgtcactgcaaatcgctacggcaatgggctggatacagaggctgcaaaagctgctgag
gagagcactgaattcatgagtccttcccattggcttacggttgtcatagataccatcatg
tccctgatggatgtcaatttcacaccaaaaggacatctgattggtctctgtcaacagcga
tcagtggacaatcgtttaccagccagtgtactggctcaggcgtcagcttccgtggccctt
agtcaggtcgtaccagcactcatcactctggatgttgatagaatctacaccaccatcaac
ttcctcctcacatggttgccaggacaaccaaatgtcccagaatcacctgtgctacagttt
catggaggacttggattgggaatgtttctgtccagacttttagaggaacacttcgctgat
atcagtggaacaaagggtatgttacagatctggaggagttttgacaagttagaggaatgt
agtcttgcaaagggtatagaaaacaggtcaggagccatcttgggtctcggtatggctgtc
tgtgcgatgtgtgaggaagggaaaacagagagtcgagctcacgttgtgtccatttacgac
aaactgctggccctgtatgacgaccttgaccctctagacaacatagtccagtcggtcagt
gtttgtacggcctgtatcgcgggcgctgcatttagctccaacattttgtcggtgactaga
gtggacacagccgtggacaaactgatgaccactcactcaaaccacccacaggtaactggg
gtgtgtctggctctgggcatgctctgttacagtctccggagggcaggtcaccctggagta
ggggatgtgaggaccagactgtgtggtagctggatcaggactttatcagcagaggacaca
gccccgatggaaaaggtagccatattgaatggactaatggccttgattggatcggagcgg
acgctaatacctgtccagagtagtgctgtcagtagtgacctgaacactgatgatgtcatc
aaggtcgcatcacagacagttgccagtggaaacgaccttggaattcagaacaatgcagcc
tggatgctgggtcacctgtatctatcggcgtgtgctgttgctgacacaagagctagtgtg
ccctctacctacggatacttgcctgagaagagtttcctacgagctgtagtggactttatg
gcagaagctggcaaagcaggagcagaaactgtaccaaaggaacaagttgaattggccttg
acctcactacaagaggaagtagaacaggcactgccccctataaattgggcagggctgttg
actcctatgatgaggatgggattcggtgatgaggtgcgacgtctcagtttaaagttggct
gtgaaacagagtggaacagctcccacagcggccttgttcctaacgacatggatgaccttg
cctttactaagtacactggatgagagatgtcagatggtcctgtacgatgccctgcctgtc
ctgatttgctccattgcaccgacagctattggatcactcctggatgtaggatctagtcaa
acttacatcagtccggacggtatcctaaaccatggcctacttcatgtcctaactggactg
accaatgccctcaaggtgaatgacccaccagaggcagtgaccgctgtcctgtacaaggct
gtgggtacactctacaccaaactggcatcgtctactcaggtgtcagtgctatgtgtgctg
gctgattgccttggtagcctacctgatgatctctttgataaaattactggtgaggatttc
ctgtacgatacgagtcattctaacggttgtctagttcgctgttacttggtggcccaaggg
aagcaacccatagccattcttaacagctgtattgatgctaccttcaacaacaaaagatgc
aaccgttctctgctatccaaatatctacagcactgcttctatcagatgaccaaaacaagg
tcagagttcactggggttatgcaaaggttacaatggctggttgaactcttggggcatgtt
cgtaacatagcaacagggactacaactctatcagatgacattacaagcaaaacagaggtt
atggatttagctgttgatgtcatcgctgctgtcctgtgtctctggatgtcgacgtcctca
gcctgtgtgttaggtatcatgccacagtttttgacctgtccagatacatcattctcacca
gattctcgatcgacatggaaaccaagcattttaccgaggcagattttacctgcttacatc
accagcatccaatcagaaccctgggatcacattctaccgaaggttgtggattgtatgaca
acactcctgtctcagcctgatgacgtcatcagcagcaggaccaggaggtcactacaaggt
tctctgcagattttgagacattccacagccttcaggaaacccatggtctggaccgagata
tacgatgctgtgttagtgaaatga
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integrated database retrieval system
