Pecten maximus (king scallop): 117335447
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Entry
117335447 CDS
T07399
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117335447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117335447
03036 Chromosome and associated proteins [BR:
pmax03036
]
117335447
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117335447
Coactivators
SAGA/TFTC/STAGA complex
117335447
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117335447
STAGA complex
117335447
TFTC complex
117335447
SAGA complex
117335447
SLIK complex
117335447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
TFIID_NTD2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
WD_LRWD1
PEP5_VPS11_N
WDR54
Nucleoporin_N
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
117335447
NCBI-ProteinID:
XP_033751341
LinkDB
All DBs
Position
10:complement(22562520..22579044)
Genome browser
AA seq
604 aa
AA seq
DB search
MKRIRYEQIHSSVHQYLKRRQYSDHEVIEKKEHRWVHDVKDMALKSSASGETTTENILLY
SSISGDTTVCEQQFSRLKTYLGEAIEPYKDELAYILYPLFVHIYLHLIYNGHKAPAHKFY
SRHVKLFESAEELVVMEALHKLYTRTEVISCKEAMEFREHKFKVRLSQEALDYLMKYLKV
DDNMMLLQIFNQHLKVEVLKEDKRTLDLKGSSNDKHESVGNERKRPTDIVRLLQQCIKQV
REGPPCMSSICFYTFLNAYQGLCTVDISPDRTLLSAGFEDSSVKLWSITPGLIQSYKTPT
DPSKLYLSADFWTSESSCEEEAEDEAEEADGEDSSEETKPQYREVAALRAHNGSVYKTCF
CADSKGLLSCSEDGSVRLWDLKTHTNKVCYRGHNYPVWDIDTSSIGNYFASASKDNTAKL
WVTDRSYPLRSFIGHSYDVDCVKFHPNCNYLATGSSDRTVRLWSLQDGKSVRLMQGHRSS
VLALAFSPNGQYLASAGDDRRIRVWDLTSGNMYKELKGHIDTIHCLSFNRDSTLLASGGL
DCCIKIWDIRKGVSLSNNNSSNNNNNPPDGNISPEQLGSFPTKSAIVTYLQFAQHNLLYA
AGSI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtatacgttacgagcaaatacactcctctgtgcaccagtatctcaagagaagg
cagtattcggaccatgaagtaattgagaagaaggagcacagatgggtacatgatgtgaaa
gacatggctctaaagagttccgcttcaggggagacaacaaccgagaatatcttgttgtat
agcagtatttcaggggacacaactgtttgtgagcaacaattctccagattaaagacctac
ctgggtgaggccattgagccttataaggatgaactggcttacatactgtatcccctgttt
gtacacatttacctccatcttatctacaatggacacaaggccccagcacataagttctac
agtcgccatgtgaagttatttgaaagtgccgaggagttggtggtgatggaggctctacac
aaactgtacacacgtaccgaagtcatcagctgtaaggaagctatggagttcagagaacac
aagtttaaagtacgcctgtcacaagaggccttggactacctgatgaaatatcttaaggtt
gatgacaacatgatgctgctacaaattttcaatcagcatttgaaagttgaagtattaaaa
gaagacaaacgcactctggatctgaagggcagttcaaatgacaagcatgagtcagtgggt
aatgagagaaaacgcccaacagatatagtgagactactacagcaatgtattaaacaagtg
agagaaggaccaccctgtatgtcatcaatatgtttctacactttcctcaatgcctaccag
gggttgtgcacagtggacatatcacccgacaggacacttctgagtgctgggttcgaggac
tcatcagtgaagctgtggagtatcacgcccggtctgatacagtcctacaaaacacccaca
gatccctccaaactctatctgtctgctgacttctggacttcggaatcctcatgtgaagag
gaggcggaagatgaggctgaggaagcagatggagaggacagcagtgaggaaacgaaaccc
cagtaccgtgaggtggcagcactgagagctcataatggctctgtatataagacttgtttc
tgtgccgactccaaaggtttactgtcgtgttcagaagatggatcagttcgtctgtgggat
ctgaagactcataccaacaaagtgtgctataggggtcataactatcctgtttgggatatt
gacaccagttcgattggaaattattttgcctcagcatcaaaggacaatactgccaaattg
tgggtgactgaccgctcttatcctttgaggtcatttatcggtcactcgtatgatgttgat
tgtgtcaaatttcatcccaattgtaactacctggctacaggatccagtgaccggactgtc
cgactttggagtctccaggatgggaagtctgtccgtctgatgcagggacacagaagttct
gtcctggccctggcattctctccgaatggacaatacctggcctcagctggtgatgaccgt
aggattcgggtctgggatctgacctctgggaatatgtacaaggaactgaaaggacacata
gacacaatacattgtcttagcttcaatagagacagcaccctgctggcatcaggtggtctt
gactgctgtataaagatttgggacatacggaaaggtgtcagcttgagcaataacaacagc
agtaacaacaacaacaacccacctgatggaaatatatcaccagaacagttaggatcattc
ccaacgaagtcggccatagtgacttatttacaatttgcccaacataatctcctgtatgct
gctggcagcatttga
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integrated database retrieval system
