Pecten maximus (king scallop): 117335625
Help
Entry
117335625 CDS
T07399
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117335625
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117335625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_12
TPR_CcmH_CycH
TPR_10
TPR_11
TPR_17
TPR_7
TPR_6
TPR_9
TPR_Slam
ARM_TT21_5th
TPR_MalT
ARM_TT21_4th
ARM_TT21_N
ANAPC3
TPR_21
TPPII_C
DUF7017
TPR_EMC2
DUF6584
Motif
Other DBs
NCBI-GeneID:
117335625
NCBI-ProteinID:
XP_033751641
LinkDB
All DBs
Position
10:36120234..36177040
Genome browser
AA seq
1147 aa
AA seq
DB search
MAAGSIEIPLRDTDEVIELDLDQLPEGDEVLSILRQEVAPLHIWVTLALEYYKSNYVEDF
VKILDASRTDAGLDYPNFERDQMRALDTLAAYYVQKAHKEKNKDKKRELFTQATLLYTTA
DKIIMYDQSHLLGRAYFCLLEGDKMDQADAQFNFVLGQTSNNIPSLLGKACIAFNKKDFR
GALAYYKKALRTNPSCPASVRLGMGHCFVKLNKLEKARMAFERALQLDPQCVGAQVGMAI
LEVNAKTQESIMSGVQLLSKAYTIDSSNPMVLNHLANHFFYKKDYQKVQHLALHAFHNTE
NEAMRAESCYQLARAFHVQNDYDQAFQYYYQSTQFSPSNFVLPFFGLGQMYIYRGDNENA
SQCFEKVLKIQPGNYETMKILGSLYANSQDLGKRDTAKQHLKKVTEQFPDDVEAWIELAQ
ILEQTDVQGALSAYGTATRILKEKVEADVPPEILNNVAALHFRLGNLQEAKKCYEASLER
SKSDAQHDETYYSAISVTTTYNLARLHEATHEYDEAERLYKNILREHPNYVDCYLRLGCM
ARNRGQIYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERIISRPNTKND
AYSLIALGNVWLSSLHQPMRDKDKEKRHQDRALAMYKQVLRNDDHNIWAANGIGCVLAHK
GCINESRDVFAQVREATADFCDVWLNIAHIYVEQRQFVAAVQMYENCLKKFYKYHNMEVM
VYLARAYYKCGRLRECKNILLKARHVSPSDTVLLYNIALVQQKLATSILKDEKSSLKTVL
CAVRDLELAHKYFCYLSQHGDRMKFDPAQAEAEARQCSDLLSQAQYHVARARKIDEAERE
MRKRHEEEREAIREKHRQDEEEKQKVRVEKGRRMMEERAKIVEKAKKIALEPEVEDKPRK
SVGRRKKHNDDGEILSESGDEAPRRKRRKKFDSGSDGEGERERGKKKRKRATGKSRRGGD
DSDDDDDRPARKRKGRKEKVSKKKLDEDGLTAKQRRKVVSKEIISSSEGSDSEGARRLKI
DDPGSDSEKEEGVGRNRRILSSASSGDGSGSDNERNSGSGSDSGRSRKSSRSGRGSGSGS
SSERGSPRRSGSESDRGRKSGSDSDSGGGRRSLAGSKSGSEAGSAPGSPAGSESGGGSPA
KSASDSD
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggctcgattgaaatcccactccgggatacagacgaagtgatcgagcttgat
cttgaccagctaccagagggagatgaagttctcagtattttgcgccaggaagtggctcca
ttgcacatctgggtcactcttgctctggaatattacaaatccaattacgtagaagatttt
gtaaagatcctggatgcatcccgaacagatgcagggctggactaccccaattttgagcgt
gaccagatgcgagcccttgacacattggctgcatactatgtacagaaggctcacaaggag
aagaacaaggacaagaagagagagctcttcactcaggccaccctcctctatactacagct
gacaaaatcatcatgtacgatcagagccatctgttgggaagagcatacttctgtctgttg
gaaggcgacaagatggatcaggctgatgcccagtttaactttgtgttgggccagactagt
aacaacattccgtcgttactggggaaagcttgcatcgctttcaacaaaaaggatttccga
ggagccctggcttattacaagaaagccttgagaacaaaccctagctgcccagcatctgtc
cgacttgggatggggcactgctttgtcaagctcaataagcttgagaaagcaagaatggcg
tttgagcgagctctccagttggatcctcaatgtgtaggtgcacaggtcggaatggccatc
ctagaggtgaatgctaaaacacaggagtcaatcatgtctggtgttcagcttctgtctaag
gcctacactatagactcgtccaatcccatggtcctcaaccatcttgccaaccacttcttt
tacaaaaaggattaccaaaaagtgcagcaccttgcgttgcatgccttccacaacacagaa
aatgaagccatgagagcggagagttgctaccagttggcacgtgctttccacgtacagaat
gattacgaccaggctttccagtattactaccagtcaacacagttttcaccctccaacttt
gtcttgcctttctttggactgggacaaatgtacatctaccgtggagacaatgaaaatgcc
tcccagtgttttgagaaggtgttaaagatccagcctggaaattacgagaccatgaaaatc
cttggctcattgtatgcaaactcacaggaccttggaaaaagagacaccgccaagcaacat
ttgaagaaagtaacagaacagttcccagatgatgtggaggcgtggatagaactcgcccag
atattggaacagacagatgtacagggagctttgtctgcgtatggaactgctacaaggatc
cttaaagagaaagtagaagccgatgtaccaccggagatccttaacaatgtggctgctctc
cactttagactcggtaacctacaggaggctaagaaatgttatgaagcatctttggaacga
tcaaagagcgacgctcagcatgatgagacatattacagtgcaatatctgttacaacaaca
tataaccttgcccgactacacgaggccactcacgagtatgacgaagccgagagattatac
aaaaacattctacgagaacatcccaactatgttgactgttacctgcgactgggctgtatg
gccagaaaccgtggccagatttatgaagcttctgattggttcaaagaagcattgcagatc
aaccaggatcatccagatgcttggtcattgattggaaacctgcatttggccaagcaggag
tggggacctggacagaagaagtttgaacgcatcatcagccggcctaacaccaagaatgat
gcatactcactgattgctctcggcaacgtgtggttgtcttcactccatcagccaatgaga
gacaaggacaaggagaaacgtcaccaggaccgggccctggccatgtacaaacaagtgctg
aggaacgatgaccacaatatctgggcagccaatggcatagggtgtgtccttgcacacaag
ggctgtataaacgagtctcgtgatgtttttgcccaagtgcgtgaagctaccgctgacttt
tgtgatgtttggctgaatattgcccatatctatgtggagcaaagacagtttgtggctgct
gtacaaatgtacgagaactgccttaagaagttttacaagtaccacaacatggaggtgatg
gtttacctggccagagcctactacaagtgtggccgcctccgcgagtgtaagaacatcctg
ctgaaggcacgccatgtttcccccagtgacactgtactgttgtacaacattgccctggtt
caacagaagttagccacatccatcttgaaagatgagaagagtagcttgaaaacagtcctg
tgtgctgtgcgagatctggaacttgcccataagtacttttgctacctcagtcagcatggc
gaccggatgaagtttgatccagctcaagctgaggcagaagccagacaatgttccgattta
ctcagtcaagctcaataccatgtagcaagagcacgcaagattgacgaagcagaacgtgaa
atgaggaaacgacacgaggaagaaagagaggctatcagagagaagcatagacaagatgag
gaagagaaacaaaaggtcagggtggagaaaggtcggcgcatgatggaggagcgagccaag
attgtggagaaggccaaaaagattgcactggaaccagaggtggaggataaacctcgtaaa
agtgtgggcaggaggaagaagcacaatgatgatggtgagatcctttcagagagtggcgac
gaagcaccgagaaggaaaagaaggaagaagtttgacagtggatctgatggtgaaggggaa
cgagaacggggcaagaaaaaacgcaagagggcaacaggaaagtcgagacgaggtggcgat
gacagtgatgatgatgatgaccgtccagcaaggaaacgaaaggggaggaaagaaaaggtg
tcaaagaaaaaactggatgaagatgggctcacagcaaaacagcgccgaaaggtcgtctcc
aaggagatcatatcatccagtgaagggtccgactctgaaggagcaaggagactcaaaatt
gatgatcctggcagtgactccgagaaagaggaaggtgtcggaaggaatcggcgaattttg
tcctctgctagcagtggtgatggtagcggttcagacaatgagaggaattctggttcgggc
tcggacagtggacgctcacgcaagagttcacgttcaggacgaggctcaggctctggatcc
agttcagagagaggttcacctcgtagatctggaagtgaatctgatagagggagaaaaagt
ggatcagacagtgattctggtggaggtcgaaggtcacttgcagggtcaaaaagtggcagt
gaggctggttcggcaccagggtcaccagctggttcagaaagtggtggtggatcgcctgct
aaatctgcctcggacagtgattga
DBGET
integrated database retrieval system
