Pecten maximus (king scallop): 117335749
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Entry
117335749 CDS
T07399
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117335749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmax03041
]
117335749
Spliceosome [BR:
pmax03041
]
Complex B
Other components
Prp19-related factors
117335749
Complex C
117335749
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
RRM_YTH1
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RRM_3
zf-CCCH_DUS3L
zf-CCCH_10
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
117335749
NCBI-ProteinID:
XP_033751822
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Position
1:complement(47079631..47087536)
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AA seq
435 aa
AA seq
DB search
MAASKGANTYNRQNWEESDFPILCQTCLGDNPYIRMMKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKIKNVCQTCLLDLEYGLPVQVRDAALKIQDNMPKSDVNKEFYTQN
MENEIANSDGTVAPGQLGKAQTPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHDKPTDPDDPLADQNIKDRFYGMNDPVADKLMNRYSNMPKLDAPEDKSITTLYVGNLG
DKIGETELRDHFYQFGEIRSINIASKQQCAFVQFTTRQAAENATEKSFNKLIMGGRRLNI
KWGKSQAQLGVTKKDGEDSEKALEPVPGLPGALPPPPEEIANNFFNLPNAPNHHLPMPPG
PPRGMPPRLIPPGAHMMPFGMFRGPPPPGVRLPPPPPGMMPMRPPPRVMMGTNMPVHYPS
QDPTRMGAVATSSKS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctaaaggagcgaatacgtacaatcgtcaaaattgggaagagtctgatttc
ccaattttatgccagacatgtcttggagacaacccatacatacgaatgatgaaggagaag
tatggaaaggagtgtaaaatctgtgcacgtcctttcacagtattcagatggtgtcctggt
gcacgtatgaggttcaagaagacagaagtttgtcaaacatgttcaaagatcaagaatgtc
tgtcaaacatgtctcttagatctggaatatggcttacctgtacaggtgagggatgcagcg
ttgaagatccaggacaacatgccaaagtctgatgtaaacaaagaattctacacacagaac
atggagaatgagattgccaatagcgatggcactgttgcaccaggacagttagggaaagcc
cagacacctagtgacatgttactgaaactggcacgcacaacaccatactacaaacggaat
agaccccacatctgctccttctgggttaaaggggagtgtaagagaggagaggagtgtccc
tacagacatgacaaaccaacagatcctgatgaccctttggcagatcaaaacatcaaggac
agattttacgggatgaatgacccagtggcagacaaactgatgaaccgctacagtaatatg
ccaaagttagatgccccagaggacaaatcaatcactacactgtatgttgggaatctcggg
gacaaaataggagaaactgaactcagagaccacttctaccagtttggagaaatccgatcg
attaacatcgccagtaagcagcagtgtgcgtttgtacagtttacaacacgacaggcagct
gagaatgccacagagaagtcttttaataaattgatcatgggtgggagacgtcttaacatc
aagtggggtaaatctcaagcccagcttggtgtcacaaagaaagatggagaggattcagaa
aaagctcttgagccagttcctggtcttccaggggccttgcctccaccaccggaagaaatt
gcaaataatttcttcaatctacccaatgcccccaaccaccaccttcccatgccacctggt
cccccaagaggaatgccacctcgtctaattcccccaggtgctcacatgatgccatttgga
atgttcagaggacctcctcctccaggtgtgaggttacctccccctcccccagggatgatg
cctatgcgcccgccccccagggtgatgatgggcaccaacatgccagttcattacccctcg
caagacccaacaaggatgggtgcagtcgccacaagtagcaagtcataa
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