KEGG   Pecten maximus (king scallop): 117335946
Entry
117335946         CDS       T07399                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pmax  Pecten maximus (king scallop)
Pathway
pmax03020  RNA polymerase
pmax03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117335946
  09124 Replication and repair
   03420 Nucleotide excision repair
    117335946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmax03021]
    117335946
   03400 DNA repair and recombination proteins [BR:pmax03400]
    117335946
Transcription machinery [BR:pmax03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117335946
DNA repair and recombination proteins [BR:pmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117335946
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 117335946
NCBI-ProteinID: XP_033752121
LinkDB
Position
10:complement(42211998..42215548)
AA seq 140 aa
MAAAPLPNEQADEDASELLFPKEFENAETLLISEVQMLLDHRKQQNESAEEEQELSEVFM
KTLNYTSRFSKFKNRETISAVRSLLMQKKLHKFELAALANLCPENADEAKSLIPSLEGRF
EDDELKQILEDIQTKRSFQY
NT seq 423 nt   +upstreamnt  +downstreamnt
atggcggcagctccacttccaaacgaacaggcggatgaagatgcttccgaacttctgttt
cctaaagaatttgaaaatgcagaaacattgttgatatccgaagtacagatgttgctggat
cacaggaaacaacagaatgagagtgctgaggaagaacaggaattatcagaggtgttcatg
aagacgcttaattacaccagcagattttcaaaattcaaaaatagagaaaccatatcagcc
gtcagaagtctactaatgcagaagaaattgcacaagtttgagctggctgcccttgcaaat
ctctgtccagaaaatgcagatgaggccaaatccttaattccaagcttggaaggtcgcttt
gaagatgatgaactcaaacagattctggaggacattcagaccaagcggagctttcagtat
tga

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