Pecten maximus (king scallop): 117336662
Help
Entry
117336662 CDS
T07399
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117336662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117336662
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117336662
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117336662
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117336662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCHC_2
zf-CCCH_4
zf-CCHC_3
zf-C3H1
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
117336662
NCBI-ProteinID:
XP_033753165
LinkDB
All DBs
Position
1:complement(49157040..49164172)
Genome browser
AA seq
278 aa
AA seq
DB search
MQEIVASVTHMRFDIEMALEQQLGSQPLPFPGMDKSGAAICTFYLSNICSKGTACPYRHI
KGDRTVVCKHWLRGLCKKGDDCEFLHEYDLSKMPECYFFSKFGECNNKECPFLHIDPSAK
IKDCPWYDRGFCRHGPKCKNRHVRRVLCQCYLQGFCLDGPKCKFMHPNFDLPTYDPTTQA
KKATIVCHMCGETGHKAISCPKGKNADGKPNIIHSSPIGRPINVQTQHSDSHSHTDRGDG
SDPRRPLDQVTCFKCGEKGHYANKCPKGHLAFLSVNAQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatcgtagcttcagttacccacatgcgattcgacattgaaatggcactggag
cagcaacttgggtcacaacctctgccgtttccggggatggataagtctggtgcagctatt
tgtacattttacctgagtaacatctgtagcaagggaacagcctgtccatatcggcacatc
aaaggggacagaactgtggtgtgtaaacattggctgagaggcctctgtaaaaagggagat
gactgcgagtttctacatgaatatgatttatcaaaaatgcctgagtgctattttttctcc
aaatttggtgaatgcaacaacaaggaatgcccatttctacacatagacccctcagctaaa
atcaaagattgtccatggtatgaccgaggcttctgtcgacatggtcccaaatgtaaaaac
cgacacgtacgcagagtgctatgtcagtgctacttacaaggattctgtttagatggacca
aagtgtaaatttatgcatccgaactttgaccttccaacatatgatccaacaacacaagct
aaaaaggctacaattgtttgtcacatgtgtggtgagacaggccacaaggctatcagctgt
cccaagggcaagaatgctgacggaaagccaaatataatacactcttcaccgattggtaga
cccattaatgtacagacacagcactcagactcccacagtcacacagatcgaggagatggc
agtgatcccagacgaccgctcgatcaagtcacctgttttaagtgtggagagaaaggtcat
tatgctaacaagtgtccgaaaggtcatctagctttcctcagtgtaaatgcacaatga
DBGET
integrated database retrieval system
