Pecten maximus (king scallop): 117336681
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Entry
117336681 CDS
T07399
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117336681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117336681
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117336681
Enzymes [BR:
pmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117336681
Messenger RNA biogenesis [BR:
pmax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
117336681
DNA repair and recombination proteins [BR:
pmax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
117336681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
RecQ_Zn_bind
Motif
Other DBs
NCBI-GeneID:
117336681
NCBI-ProteinID:
XP_033753181
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All DBs
Position
10:38539930..38542148
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AA seq
432 aa
AA seq
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MAAVIDDSLRQNLCDIFKIHELRPHQNRAIQALSEGKDVFIGTRTGSGKSLAYECYPLVS
KGAIVLVIAPLVNIMSEQCKRLIDHGFKATYIGKDHHDDERIAEGYYDFVFGSPECFLDD
TKWRNMLKSSVYQERLKLIVVDEAHTMIQWGESLKGEDPFRVCFSRIGELRSLCKKAQVL
ALTATSGPTQRRKIMKTLCFLPNNDVIVESPDRNNIKITTMCIPVTHDLEDTFRFLLNDL
ARLKENLPRHVIFCETIVNVSKVYSIFVKHFGQACEMINMYHSKTTEKVKEKIRNDLAVD
GKIRILICTNSAGMGVNFYGLNNIIHYGLPREMDTFVQQMGRAGRDGNFAHELVLYTAHK
KHLSRVEDDLVKLVKDESQCRHYGLCHAYATNHEQIEPKHNCCDVCQKILFGETEMLEMP
LTSDSEEESEDK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtcatagacgactcacttcgacagaatctgtgcgatattttcaaaatacat
gaactgagaccacaccaaaaccgtgcaattcaagctcttagtgaaggaaaggatgtgttt
ataggtaccagaacaggaagcggcaagtcgcttgcatatgaatgctatccactcgtctcc
aaaggcgctattgtgctagtcattgctccgttagtgaacattatgtcagagcaatgcaaa
cggttgattgaccatggattcaaggcaacttatataggcaaagaccaccatgatgatgag
agaatcgcagaagggtattatgatttcgtgtttggaagcccagaatgttttttagatgac
acaaagtggcgcaacatgctcaaatcgagtgtttaccaagagagactaaaactgattgtt
gttgatgaggcccataccatgatacaatggggtgagagtttgaaaggagaggatccgttc
agggtgtgtttttcaaggattggagaacttcgttctttatgcaaaaaagctcaagtctta
gcactaacagcaacttctggtccaacacagaggaggaaaatcatgaagaccctttgtttc
ctacccaataatgatgtgattgttgaatcgcccgacagaaataacatcaagatcactacc
atgtgtattccagttactcatgacttggaagacactttccgattcttactgaatgatctt
gcaagattaaaggaaaatttaccaaggcatgtgatcttttgtgaaacaattgtaaatgtt
tcaaaggtttattcaatctttgtaaaacatttcggtcaggcatgcgaaatgataaacatg
tatcatagcaaaacaacagagaaagtaaaagaaaaaataagaaatgatttggcagtagat
gggaaaattcgtattctgatatgcacaaattcagctggaatgggtgtgaacttttatggt
ttaaacaacatcattcactacggattgccacgagagatggacacttttgttcaacagatg
ggtcgagctggacgagatggcaattttgcacatgaacttgttttgtacactgcccacaag
aaacatttaagtcgcgttgaagatgacctcgtgaaacttgtgaaggatgagtcccagtgt
agacactatggcttatgccatgcctatgcgacaaatcatgaacaaattgaaccaaaacac
aattgttgtgatgtgtgccagaaaattttgtttggtgaaacagaaatgctggaaatgcct
ttgacaagtgacagtgaggaagaatcagaggacaaatga
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