Pecten maximus (king scallop): 117337258
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Entry
117337258 CDS
T07399
Name
(RefSeq) CMT1A duplicated region transcript 1 protein-like
KO
K10266
F-box and WD-40 domain protein 10
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmax04121
]
117337258
Ubiquitin system [BR:
pmax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117337258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
NBCH_WD40
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WDR90_beta-prop_4th
WD40_like
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
117337258
NCBI-ProteinID:
XP_033754044
LinkDB
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Position
1:complement(51025594..51067781)
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AA seq
1280 aa
AA seq
DB search
MVEVCQQIPHTSMSSLSDGVMKHPNNKVELFEFNIGQALHMRCVNTKKACGQCESCQLNT
KLKEAKGWLEKIGDHSKKRFMLGLMRRFQSVDLLQQMVTLLQPLLYKDFTYARSRTAPSL
ATDSASLSSDRAVPSKDVEAFILTTWNWFQKANYWSKANYAISLLQLCDSHLLHILGTQA
RTLLVSEERAASFAAEDDLLEAASIASTNYTYQSDERPDLDLLIRATPEYGIPKHNPLTG
EELFLDDEIENDDSGDESFTSMDILSVDPACMVVPTSAKAASGVTKYKDFIRYLPVHIAK
YVLGFLDIATLHNAVCVNSYWSSLVEEVHQEFRINQDLSEEVMLMQGAAAQGANPVYAKD
IDVLVPNLHLGTREVITNKDQIVKTKYKNEVNFETALTGISCRKVIMEERNVYCGSYNVM
VLKDVEDSHRVVHTCGGKLIAIGSKDRKVRFIERESGKEQGPVITGHAGSVRCVYLCESE
GYVLSGSYDTSIRMWNMETGKCMRIFRGHRDTILTVLVYGDYLVSGAKDNCCKVWNMQTG
KCQRTFKHRKPVWAVAMNEELCITGCEGGKVKVWDIKTGDLVKMLNGHHDQVTSIKFDKW
HIITGSKDGYALVWSGQGYLNRCLNALRHPKAVLCLEFMYLRVITGSADGRLRIWNMVNG
QCCRIMRGNSRSDAIQSIIAIGNRITLNTSVNLLVLNFEKVEWDYTLENDKVPPLVQYSS
YADTPIRSLPYPYIRAQRMVRAGATNSKIVLHNRPEERKERISESGRIHPQSSFHAPQFP
HSAKALSTRSMASARQIQSQGHTDVGLESMHFPAGTESRLALSEVKTAVSSRGKSRASTA
PSKPPLPKTRPLTHKSGVSQYSVMIADPNPDQYDDDDDDDENGPSASGLKRRVSWAFEKP
LLPKSKDISLSETKSLLRSQMRMKTESIVPPDFIYLTVNAIQNSMRPTETTSNTQVNFKL
RNNIADTLRNRPSSSPPKIDPRTKVGPGEIGIERFIIEDKVDTVSEFSDVKSVKSIKSTR
AKDDMMPDSPEKEIYATPCDIKPTKIKLRKSLHSKKTKSTVPIGRVIRPISASAKRQEAD
PVLKARGIRPGTAPALTNRPGTGVSVRSTIAPSLPGVTLPQKPKGQYGLSSTANESSIVP
MLMYPADMKEKLSQLIQEKRSQSKIEDVQSAGDGGQILGKVSAYNDPMRSHVKFDLRTYE
QEKDYINSIEKMFLEQKLREEEELEKKQRSAWLARAKSRPGSQPPSSKVRPGSNVSTPKS
RPGSFCPNQVKIRPHSQPPC
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaagtttgtcagcaaattcctcacaccagcatgtcgagcctgagtgatggggtc
atgaagcacccgaacaataaggtggagctctttgagttcaacatcggacaggcattgcac
atgcgatgtgtaaacacgaaaaaggcatgcggacaatgtgaatcatgtcagctaaacaca
aaactaaaagaggcaaaaggatggttggaaaaaatcggagaccattccaaaaaacgtttc
atgttaggtttaatgcgacggtttcaaagtgtggatctgttgcagcagatggtgacgttg
ttgcagccgttactgtataaagactttacgtatgctagaagtcgaacagctccaagtctg
gcgacagattcggcgtctttaagttcggaccgtgccgtcccatccaaagatgtcgaagca
tttatcttgacgacatggaattggtttcagaaggccaactattggtcaaaagcaaactat
gcaatatctttgctacaactttgcgacagccacctgctccatatcctggggacccaagcg
cgaaccctccttgtgtcggaagagagagcagcttcatttgcagcagaggatgacctgttg
gaagcagcatctatagcaagtaccaattacacatatcagtctgacgaaagacctgacctt
gacctacttatccgggcaacacccgagtatggcatcccaaagcataacccactcactggt
gaagaactcttcttggacgatgaaattgaaaatgacgacagtggtgatgaaagttttacc
tcaatggacattctgtcagttgatcctgcatgtatggtcgttccgacatcggccaaggcg
gcatcaggagtaactaaatataaagactttatccgatatctacctgtccatattgctaaa
tatgtgctgggatttttggacattgctacactacacaatgcggtgtgtgtcaatagctat
tggagctctctagtggaggaggtacatcaggagttccgaatcaaccaggacctgtcggaa
gaggtcatgctcatgcagggtgctgcagcccaaggggccaacccagtatatgccaaagat
atagatgtgcttgtaccgaacctccatcttggaacaagggaggtaattactaataaagat
caaatcgtcaaaaccaagtacaagaatgaagtcaatttcgaaacggcattgacgggaata
tcgtgtcgcaaggtcatcatggaagaacgcaacgtttattgtgggtcatataatgtcatg
gtgctgaaagatgtagaagactcccatcgtgttgtacacacttgtggaggtaaactgatc
gccattgggtctaaggaccgtaaggtacgatttatcgagcgtgaatcgggaaaagagcag
ggacctgtcatcaccggacatgctggaagtgtccgctgtgtctacctgtgtgagtcggaa
ggctatgttctcagcggcagttacgacacaagcatcaggatgtggaatatggagacgggc
aagtgtatgaggatattccgcggtcaccgggatacgattctcaccgtcttggtgtatggg
gattacttagtttctggagccaaagacaactgctgtaaagtttggaacatgcaaactggg
aagtgtcagcggacatttaaacaccgtaaacctgtgtgggccgtcgcgatgaatgaggag
ctgtgcatcactggatgtgaaggtggcaaggtcaaggtctgggacataaagactggtgac
cttgtcaagatgttgaatggacatcacgaccaggtcacttccatcaagtttgacaagtgg
catattatcactggcagcaaagatggttacgctttagtgtggagtgggcagggctacctc
aaccgctgtctcaacgccctcagacacccaaaggcagtcctctgcttagagttcatgtac
cttcgcgtgatcacgggatcagccgatgggagactccgcatctggaacatggtcaacgga
cagtgctgccgaataatgcggggaaacagtcgcagtgatgcaatacagtccatcatagcc
attggtaacaggataaccctgaatacgagtgtcaacctactggtgcttaactttgagaaa
gtcgagtgggattacacgctggagaatgataaagtaccacccctggtccagtacagctcg
tacgctgacaccccaatccggtccctcccttacccctacatccgagcccagaggatggta
cgagctggtgccacaaactcaaaaatagttctacataatcggccagaggagcgaaaggaa
agaatttcagagagtggacggattcatccacaatcatcattccacgctccacagtttcca
catagtgctaaggccctgagtactcgcagtatggcaagtgctagacaaatacagagtcag
ggccacactgatgtggggttggaaagtatgcatttcccagccggcactgagtcccgtctg
gcactgtctgaagtgaaaactgctgtctcaagtcgagggaagagtcgggcctctaccgct
ccttcaaagccgccactgccaaagacacgacctttaacccacaagtctggggtatcacaa
tatagtgtgatgattgccgaccctaatccggatcagtacgatgacgacgacgatgatgac
gagaatggaccttcagcttcaggtctcaaacgaagagtttcctgggcatttgagaagcca
cttctcccaaagtccaaagatatttctctttcagagacgaaatcattgctacgatcacag
atgcgaatgaagaccgagagtatcgtgccaccagatttcatatatctgacagtcaacgcc
attcagaattccatgcggcctacagaaacaactagcaatactcaggtaaactttaaacta
aggaataatattgctgatacattaagaaataggcctagttcttctccaccaaaaatcgac
cctcgtactaaagttggtccaggagagatagggatagaaaggtttattattgaggacaaa
gtggacacagtttcagaattctctgatgtcaaatctgtaaaatctatcaaatcaacaaga
gcaaaggatgatatgatgccggatagtccggaaaaagaaatatacgctaccccgtgtgat
atcaagcctacaaaaattaaattaagaaaaagtttgcattcaaaaaagacaaaaagcact
gtgccaattggtcgagtcattagaccaatatctgcttctgctaagcgacaggaagcagac
cctgtattgaaagcgcgtggaattcgaccaggaacggctccagctctaacaaatcgtcca
ggtacgggtgtttcggtgaggtccactattgcaccctcattgcctggtgtgactctcccg
cagaaacccaaaggacaatatggcctctccagcacagctaatgagtccagtattgttcca
atgctcatgtatccagctgacatgaaagagaaattgtcacagttgattcaagaaaaacga
agtcagagcaaaattgaagatgtgcaatcagccggtgatgggggtcagattttgggaaaa
gttagtgcttacaatgatcccatgcggagtcatgtaaaatttgatctccgaacatatgaa
caggaaaaggactatatcaatagcatagaaaaaatgttcttggaacaaaaactgcgagaa
gaagaagagctggagaaaaaacaacgttcagcttggcttgctcgtgctaaatccaggcca
ggttcgcaaccaccttcttcaaaagtccgaccggggtcaaatgttagcactcctaagtca
agaccagggtccttttgtcccaatcaagtgaaaatccgtccacattcacaacctccctgc
tga
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