Pecten maximus (king scallop): 117337714
Help
Entry
117337714 CDS
T07399
Name
(RefSeq) exosome complex exonuclease RRP44-like
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117337714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117337714
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117337714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
CSD2
Rrp44_S1
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
117337714
NCBI-ProteinID:
XP_033754703
LinkDB
All DBs
Position
11:14905324..14928245
Genome browser
AA seq
956 aa
AA seq
DB search
MLTSKTFVKKTKRGKILKIVREHYLRDDISCGSESCQICDPFDFGQPLSSEPENKSRLCL
TPHYIIPDTNVVFDQMDVLEDNVVQNVVILQTVLDEVRHRSSPGYKRLKSMLANPSKHFF
TFCNEFNKHTYVERQKGESANDRNDRAIREATRWYQDHLRADGQSDLIIDVVLLTNDADN
RRKALEQGLKAFTVHEYVESLENCGHLVDLLSRTHMKVHSQDRLLFPEHLPLSEIQRGIK
SGRYFQGSFMASRENYLEANVSVHDMDKMVFIQGHMNLNRAVHSDVVAIEMLPEEEWSCP
SSMVLEESTEKVVEDSMETEDNAIKRIKVPKELRQPTGRIVGIIKRNWRQYCGILRPSSV
KEGTRHIVVPAEKRIPKIRIETRQAADLITQRIVVAIDSWPRKSRYPQGHFVRKLGNIGD
KETENEVLLLEHDVPHSNFSEAVLACLPKLPWIITEEDYKRRRDLRDINICSVDPPGCTD
IDDALHCRELANGNLEVGVHIADVSHFIRPGTAIDKEAAERGTTVYLTDRRIDMVPELLS
SNLCSLRSNVERFAFSILWEVTHDAEIVSTSFTKSVIKSKAAFTYAEAQMKIDDTTQNDS
LTRSLRHLNRLAKILKQRRIDAGALTLASPEIRFHIDSETHEPIDVQAKQIMETNSMVEE
FMLLANVASAKKTLEEFPDCACLRRHPAPPPSNFDPVIKAALSKGFTIDVSKGKGLADSL
KAAVVPSDPYFNTMLRIMTTRCMMQAVYFCSGMIPESEYFHYGLAAGIYTHFTSPIRRFS
DIIVHRLLAVCIGADASYPSLTDKHKTQVVCNNLNYRHKMAQYAGRASVNLHTHIFFKNR
ITNEEGYVLFVRQNALQVLIPKYGLEGTLYLSDGKSKSNPRFTYNEEASTQTCGNVTFHV
FDQVIIELSIDQSNVQHLKLSLKLVKPQIPDFSVPPVSDEDSEPPKKKQKKDKTTK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgttgacttccaaaacttttgtgaagaaaacgaagagggggaaaatacttaagattgta
agggagcattatctccgtgatgacatatcttgcgggtcggaatcttgtcagatatgcgat
ccttttgacttcggccagccgcttagctccgaacctgaaaataaaagtcgcctgtgtttg
acgcctcactacatcataccagatacaaatgttgttttcgaccagatggatgttttggaa
gacaatgtggtgcagaatgttgtgattctacagacagttttggatgaggtgaggcaccgg
agctccccaggctacaagagactaaaaagcatgttggcaaacccaagcaaacatttcttc
actttctgtaatgaattcaacaaacacacatatgtggagcgacaaaaaggagaatctgcc
aacgaccggaacgaccgtgcaatcagagaggcgacaagatggtaccaggaccacctgcgg
gcagatggccagtccgatttgatcattgatgtagtccttctaacaaatgatgctgacaac
aggagaaaggcattggaacaaggccttaaagcattcacagtccatgaatatgtcgagagt
ttggagaactgtggacaccttgtagatctgttgtctcgaacacatatgaaagtgcattct
caggaccgcctcctgttcccagagcacctaccactgtccgagatacagcgtggaatcaaa
tcagggcgttacttccagggaagcttcatggctagccgggaaaactacctagaggctaat
gtcagcgtccacgacatggacaaaatggtgtttatacaaggccacatgaacctgaacagg
gcggttcatagtgatgtggttgccatagagatgttaccagaagaagagtggagctgtcca
tcctcaatggttcttgaagagtccacagagaaagttgtggaagacagcatggaaacagag
gacaacgccattaaaagaataaaagttcccaaagagttgcgtcaaccaacaggcagaatt
gtcggcatcatcaagagaaattggcgacagtactgtggaattctacggccctcatcagtt
aaagagggtacccgtcatattgtcgtaccagcagagaagaggattcctaaaatacgtatt
gagacgaggcaggcagctgaccttatcacacagagaatcgtagttgccattgacagttgg
ccacgcaaatcccgctacccacagggacattttgtgaggaagcttggtaacattggcgac
aaggagacggagaacgaggtcttgttattggagcacgatgtcccacactcgaacttctct
gaagctgttctcgcctgtctcccgaaactcccatggatcataacagaagaggattacaag
cgccgtcgagaccttcgtgatatcaacatttgtagtgtagatccccctgggtgtacagac
atcgacgatgctctacactgtcgtgaactggctaacggaaaccttgaggtgggtgtacac
attgctgatgtatctcacttcatcagacccgggacggccatcgacaaggaggccgctgag
cgcggtaccactgtttaccttacagacaggagaatagacatggtaccggaactcttaagt
tccaatctgtgttccctcaggtcgaatgtggaaaggtttgcattttcaattctgtgggaa
gtgacacatgatgctgaaattgtatcaaccagttttacaaagagtgtaattaagtctaag
gcagcctttacctatgcagaagcacagatgaagatagatgataccacacagaatgactct
ctcaccagaagtctacgccatctcaataggctagccaagatcttaaaacagcggagaatc
gatgcaggagctctgaccctcgcatcacctgaaatccgattccatatcgacagtgagacg
catgaaccaattgatgttcaggctaaacagatcatggaaactaactccatggtggaagag
ttcatgttactggcgaatgtcgcatctgccaagaaaacactagaggagtttcctgattgt
gcgtgtctgcggcgacatccagcaccccctccatctaactttgatcctgtcatcaaagca
gcgttgtccaagggttttacaatagatgtatcaaaagggaagggactggccgacagttta
aaagcagccgtcgtaccatcagatccatacttcaacacaatgctccggattatgaccacc
cgatgtatgatgcaggcagtctatttctgcagcgggatgattccagagtctgaatatttc
cattacggtcttgcagctggcatatatacccactttacatcgcctatcagaagattctca
gacatcattgtacaccgattactagctgtgtgtataggagcagatgcctcctacccgagc
ttaacagacaaacacaaaactcaggtggtgtgcaataatttaaactaccgacacaagatg
gcacagtatgccggccgagcttcagtcaatcttcacacacatatttttttcaagaaccgc
atcacgaacgaagaaggctatgtactgtttgtgagacagaacgccttacaggtgcttata
ccaaagtatggcttggaggggaccttgtatttgagtgacggaaaatcaaagtccaaccct
cgctttacctacaacgaagaggccagcacacagacctgtggtaatgtgaccttccacgta
tttgaccaggtcatcatagagcttagcatagaccaatcaaatgtccaacacctaaagctt
tctctcaagttggtcaagccgcagataccagacttcagtgtaccgccagtcagtgacgag
gacagtgaacctccaaagaaaaaacagaagaaggacaaaaccacaaaataa
DBGET
integrated database retrieval system
