Pecten maximus (king scallop): 117338551
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Entry
117338551 CDS
T07399
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117338551
04121 Ubiquitin system [BR:
pmax04121
]
117338551
Enzymes [BR:
pmax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117338551
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117338551
Ubiquitin system [BR:
pmax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117338551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
SGL
DUF5128
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
ANCHR-like_BBOX
zf-RING_5
DUF5711
Vgb_lyase
zf-C3HC4_4
zf-RING_2
RING_XB3-XBAT31
TFIIA
Agenet
WASH_WAHD
Vac17
Siva
Med3
Motif
Other DBs
NCBI-GeneID:
117338551
NCBI-ProteinID:
XP_033755799
LinkDB
All DBs
Position
11:23982332..23997003
Genome browser
AA seq
806 aa
AA seq
DB search
MAAYADSIGEQLGCPLCHNRFDDPRILPCLHSFCKRCLEQATRDQGPSPSQPGQEFSGPL
ECPTCHQVVPLNSGGIDSLPSNLIVSNIFDVMVSTQHDLEDSSIDLERQRPITGTKWCNS
CDEGSKATCVCKNCSEYLCDNCVRAHQRVRLTKDHFIERFSMLNLQSSSILHLGTTCQPR
LSSPSMQQQQQQQEYQQQKQQQQQAIAHPDHQDSYCTRHEHGILRLYCDTCSRAICGDCT
MNEHVGHNFIYLQDAIDNSKTITLKLLADAKAGIKALEESIELTQGMAERVEVRTQAVTT
EVRTIIHRHMAALEERERDLLRRVEKIRQVKGKSLHIQVDDLKQGLSSLMQTVSEVEKLL
NTGTQIDILKTKDQMVAEMQNVRKLRGHLQPHEDDCIMFTPPDLALYNAIGKMGIISSSA
YAPNCIATGDGLKKALKGKVSLFMIHTKDHHGEPRVIGGDPVECIIHSSDGAFYRAEVID
RQNGTYAVTYRPQLEGQHIISVTIHGKHIAESPFTVNIRSGRNYATIGPMLFEFGGEGEV
EGKLCRPWGVCCDRDGNVVIADRSNNRIQVFNSDGTFCHRFGTSGTRNGQFDRPAGVACD
NQGRIIVADKDNHRVQIFTIDGTFLLKFGEKGNKNGQFNYPWDVAVNSDGKILVSDTRNH
RVQLFSPDGQFVNKYGFEGSLWKHFDSPRGVCFNNEGHMVVTDFNNHRLLVIHPDFQTAR
FLGTEGSANGQFLRPQGVVVDQEGNIIVADSRNHRIQVFQPNGNFLCKFGTPGAGPGQLD
RPSGLCVSPEGYIIVVDFGNNRLQVF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatatgccgactcgattggggagcagttgggatgccctctctgccacaaccga
tttgacgaccctcgaatattgccatgtctccattccttttgcaagcgatgccttgaacag
gccacacgggaccagggtccctccccgtctcagccaggacaggagttttcgggaccccta
gaatgtccgacatgtcaccaagtcgtcccccttaactctggggggatcgacagcttgcct
tccaacttaattgtgtcaaacatttttgacgtaatggtatcaacacaacatgatttagaa
gactcctctatagatttggaacgacaacgacccataacaggtacgaagtggtgcaactcg
tgtgacgagggtagcaaagcaacgtgcgtttgtaaaaactgcagcgaatacctgtgtgat
aactgtgtacgggcacatcaaagagttaggctcactaaagatcacttcattgaacgtttt
tcgatgttaaatctacaatcaagcagcattttacatctaggtacaacatgccaacctcga
ctgagctcaccatcaatgcaacaacaacagcagcaacaggaatatcaacaacaaaaacaa
caacagcaacaagccatagctcaccctgatcaccaggacagttattgtactcgacatgaa
catggaatattgcgtttatactgtgatacctgttcaagggcaatatgtggtgattgtacc
atgaatgagcatgttggacataatttcatataccttcaagatgcaatagataattccaaa
acaataacattgaaacttctcgcagatgccaaagcagggatcaaagctcttgaagaaagt
attgagctcactcagggaatggccgagcgtgtggaagttagaactcaggcagttacaaca
gaagtgagaactatcattcacagacacatggcagcgctggaagaaagagaacgcgattta
ttgcgtcgtgtagaaaaaattcgccaggtcaaaggaaaatcgttacatatacaagttgat
gatcttaaacagggactttcttcacttatgcaaacagtcagtgaagttgaaaaacttcta
aatacgggtacacagattgatatactcaaaaccaaagaccaaatggttgcagaaatgcag
aatgttcgaaaattgcgtggtcacttacaaccacatgaagatgactgtatcatgtttaca
cctccagatttggcattgtataatgctatcggcaagatgggaataatcagtagtagtgca
tatgcaccgaattgcattgctactggtgatgggctaaagaaagctttaaaaggaaaagtt
tcacttttcatgattcacactaaagatcatcatggggagcctcgcgtaatcggtggggac
ccagtggagtgcatcattcatagttcagatggtgcattctatcgggcagaagtaatagat
cgacaaaatggcacttatgcagtcacatatcgtccacaactagaaggacagcatatcata
tcagtgacaatacatggcaaacatatagcagagagccctttcactgtcaatattcgcagt
ggacgtaactacgcaacaataggaccaatgttgttcgagttcggaggggagggagaggta
gaaggaaagctgtgtcgaccctggggcgtttgttgtgaccgtgatggaaatgttgtaatt
gcagaccgaagcaacaatcgtatccaagtcttcaactcggacggcacattttgtcacagg
ttcggaacctctggtacacgaaatggacaatttgatcgcccagcaggtgtcgcatgtgat
aatcaagggcgaataattgtggcagacaaagacaaccatagagtgcagattttcacaata
gatgggacatttctgttgaagtttggtgaaaaggggaataaaaatggccagttcaattac
ccatgggatgtagctgtcaatagtgatggcaagattctggtttccgacaccaggaatcat
cgagttcaacttttttcaccagatggacagtttgtgaacaaatacgggtttgaaggatct
ctttggaagcattttgattcaccacgtggtgtgtgtttcaacaacgagggtcatatggtg
gttaccgatttcaacaaccaccgacttctggtaatccacccagacttccaaacagctcgg
tttttgggaactgagggtagtgcaaatggtcaatttctacgaccacaaggcgtggtggtg
gaccaagaagggaacatcattgtagctgattctaggaatcatcgcattcaggtgttccaa
ccaaatggcaatttcctgtgtaaatttggaacccctggagcaggcccagggcagcttgat
cgtccctctggtctgtgtgtctccccagaaggctatattattgtggtggactttggaaac
aatcgcttacaggtattttaa
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