Pecten maximus (king scallop): 117339144
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Entry
117339144 CDS
T07399
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
pmax03015
mRNA surveillance pathway
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117339144
09122 Translation
03013 Nucleocytoplasmic transport
117339144
03015 mRNA surveillance pathway
117339144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117339144
03041 Spliceosome [BR:
pmax03041
]
117339144
03009 Ribosome biogenesis [BR:
pmax03009
]
117339144
03012 Translation factors [BR:
pmax03012
]
117339144
Enzymes [BR:
pmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117339144
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117339144
mRNA cycle factors
Stress granule specific factors
117339144
Spliceosome [BR:
pmax03041
]
Complex C
Other components
EJC/TREX
117339144
Ribosome biogenesis [BR:
pmax03009
]
Eukaryotic type
90S particles
Helicases
117339144
Translation factors [BR:
pmax03012
]
Eukaryotic type
Initiation factors
eIF-4
117339144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
UvrD-helicase
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
117339144
NCBI-ProteinID:
XP_033756457
LinkDB
All DBs
Position
1:57609282..57612672
Genome browser
AA seq
403 aa
AA seq
DB search
MAERQDRRVVPDDIMKNIEFETSEDVEVTPTFDNMGLREELLRGVYAYGFEKPSAIQQRA
IKPIVKGRDVIAQAQSGTGKTATFSMSILQCLDTQLRETQALVLSPTRELAVQIQKVILA
LGDYMNVQCHSCIGGTNVGEDIRKLDFGQHVVSGTPGRVFDMIRRRNLRTRSIKMLILDE
ADEMLNKGFKEQIYDVYRYLPPATQVLLISATLPHEILEMTNKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMH
GDMRQDERDAIMKEFRSGASRVLISTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVSINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagacaagacagacgcgtggtacctgacgatattatgaaaaatatcgaattt
gaaacaagtgaagatgttgaagtcactccgacctttgataacatgggtttgagagaagaa
cttttacgtggagtatatgcttacggatttgaaaagccgtcagccattcaacagagagct
ataaaacccattgtgaaagggcgagatgtgatcgctcaggctcagtcgggtacgggaaaa
acagctacattctccatgtccatcttacagtgtttggacacacaattacgagaaacccag
gccttggtactgtctccgacgagagaattggcagtccagatccaaaaggttatactggcc
cttggagattacatgaatgtccagtgtcattcgtgcatcggaggtacaaatgtcggtgaa
gacatcagaaaactcgactttggacaacatgtagtatcgggcacacctggaagagtattt
gatatgatcagaaggaggaatctgaggacccgatctatcaaaatgcttatcctcgacgaa
gcagacgagatgctgaataaaggtttcaaagaacagatttatgatgtgtatagatacctt
cctcctgcaacacaggttctgctcatctctgccacattaccccatgaaattttggagatg
accaacaaattcatgacagatcccatccgtatcctggtcaagcgtgatgaactgacactt
gagggaatcaaacaattctttgttgcagttgaaagagaggaatggaagtttgatactctt
tgtgacctgtatgacactctcaccatcacacaagctgttattttctgtaacacaaaaaga
aaggtcgactggttgacagagaagatgagggaagccaattttactgtttcatcaatgcat
ggtgacatgcgacaagacgaaagagatgcaatcatgaaagaattcagatcaggtgcgagt
cgtgtgctgataagtacagatgtatgggcgagaggaatcgacgtccaacaggtgtcgctg
gtcatcaactacgaccttcccaacaacagagagttgtacatccacaggattggtcgttct
ggacgattcggacgaaagggtgtgtccatcaactttgtgaagaatgacgacatcaggatt
ttaagagacattgagcagtactactcaacacagattgatgaaatgccaatgaatgtggca
gatttgatttaa
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integrated database retrieval system
