Pecten maximus (king scallop): 117339378
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Entry
117339378 CDS
T07399
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117339378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmax03000
]
117339378
Transcription factors [BR:
pmax03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117339378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Death
bDLD3
NttE
Motif
Other DBs
NCBI-GeneID:
117339378
NCBI-ProteinID:
XP_033756865
LinkDB
All DBs
Position
1:32484388..32508618
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AA seq
1158 aa
AA seq
DB search
MSDPDGDTSDSVEYEFSIESDPNIVFQVKKNKITNGEITQMVLDDESEPHIEIVEQPQPR
GFRFRYECEGPSHGGLQGEKSEKYRKTYPAIKIKNYNGPARVVVTLVTDEVIPRPHAHKL
VGRNCNEGTCIVELKGGQNSLTFPNLCVQHVTRRKASDVIEQRILESIKLDKLVKLGDLN
AQADLTVEDVNQAKVQSEKLAKEMQLNVVKLCFQAYLRDENGMFSRLLPSVLSNPIYDSK
SPGANALKICRMDKYGGCCTGNEEVFLLCEKVQKDDISVRFVEQDEEGQVTWEAYGTFGP
FDVHRQYAIVFKTPPYKDPTIDRAVNVLIMLQRKSDSESSDPKSFTYYPQNIDMDDIRKK
RKKTLPIYPGSGNFGSGGGDKQRGGSGNFFGAVNGNSLSDSQGNMPTTVNQDEDAPLSRR
TMAKARRNPVQQRITPHDDLETDTPPAVTLACQPPKQAVNPYFSSMQMPQQTLPQTMPIR
IPQTTAYTTPSNTNMTPPQTMYMPNTLNTSVPQTSAQNTYMATSHNNQIGMSQGHQISMP
HMPQQITQLPTMYTNNQYQGQILMAPSNLYMNPNLMTRGSERETSPIPSIPLTVHDDREI
IEKYSDLIPLTVSADMGTCPPQIPLTVSGHDVVDGMVKMESPAIVHQPVKRVHKFHSDPG
SRTTKSVHGRFYFLALYSIFFVLNRRLIIVLYKIIPKLAFSLFYPFLVSGLVRMGTCKYL
TCIADEDGDIPLHTCIINHQLEVVHNLLDVMETLPNAQSKINVHNRRLQTPLHLAVITGQ
EGVVDALLKAGGEPTVLDRHGNTAAHLASLYKKDKCLAAMLKYIRPRVSRQRPFPELDIK
NIDGLTPLHISAQKEDLTSIKLLIKGKADVNMADGKSGRTALHYAAGSDDLATAGWLLLE
AKAAVNATCFDGNTSLHVACGRQNVGMVALLMAAGADPKIENMDYEDESSENENEDEKDK
DEMIRKDKCQRGRTAEDFAMDNDKILKVLYGHPYTSMSEIHEEADNREYEQTAEMFTSLS
LVKGEQEETGLSSIGPITDGGDMASITYPQRVKLSQLLDPDREGQDWRSLADRLGFSKLI
SGSQTGHSPTRILFTYYEECGGTVKRLKDALMALHRTDAVKLLSHPDSETTDVRKEKTIS
SEGSLIDSGLNSKSLTLH
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccccgacggtgatacctctgactcagtcgagtatgaattttccattgaaagc
gatccaaacattgtattccaagtgaaaaagaacaagattaccaatggtgaaattacccag
atggtgctcgatgacgaatctgaacctcatattgagattgtagagcagccacaaccccgt
ggattccgatttcgttatgaatgtgagggcccatctcatggaggtctacagggagagaaa
agtgaaaaataccgcaagacttaccctgctatcaagatcaagaattacaatggacccgcc
cgtgtggtggttaccttggtaacagatgaggtcatccctcgtccacacgcccataaactg
gtggggcgaaactgtaatgaaggaacttgcattgtggaattaaaaggtggacaaaactct
ctgacgtttcccaacctgtgtgtccaacatgtgacgagaaggaaagcatcagatgtgata
gaacagagaatcctggagtccattaaacttgacaaactcgtcaaactaggtgacctgaac
gcccaggcagaccttacagtggaagatgttaaccaggctaaggtacaatctgagaaactt
gccaaggaaatgcagttaaatgttgtgaagctgtgtttccaagcctacctacgagatgaa
aatggaatgtttagtcgtctgcttccctctgttctatccaaccctatatatgatagcaaa
tcacctggagccaatgccctcaaaatctgtcgcatggataaatacgggggctgttgtact
ggaaatgaagaggtgtttctgttgtgtgaaaaagtacagaaagacgacatctcggtaaga
tttgtggagcaagatgaggagggtcaagtgacttgggaggcgtatgggacctttgggcct
tttgatgtccacagacagtatgccatcgtcttcaaaaccccaccctacaaggacccaacg
atagacagagcagtaaatgttctcataatgttacaacgcaagtcagattctgaaagcagt
gatccaaagtcttttacctactaccctcagaacatcgacatggatgacattcgtaagaag
agaaagaagactctgccaatatatccagggagtggtaactttggctctggaggcggcgat
aaacaacgaggaggcagtggcaacttcttcggtgcagtcaatggaaactcgttgtctgat
agccaaggaaacatgcccacaacagttaaccaagatgaagatgctcctctgtctagaagg
actatggctaaggcaaggcgtaatcctgtacaacaacgcatcaccccccatgatgacttg
gaaactgatacaccaccagctgtcacattagcatgtcagcctccgaaacaagctgttaac
ccctatttcagcagtatgcagatgcctcagcaaactttaccgcaaaccatgcctattagg
ataccccagaccacagcctataccacgccctctaacactaacatgactccaccacaaacc
atgtatatgccaaacaccctaaatacatcagttccacaaacatctgcccaaaatacgtac
atggctacctcccacaataaccaaatagggatgtcccagggtcatcaaatatcaatgcct
catatgccacaacagataactcaactaccgaccatgtacactaacaaccagtaccagggt
cagatcctgatggctccatccaacctgtacatgaaccctaaccttatgactagaggctca
gagagagagacttcacccattccaagcattccactaactgtccatgatgacagggagatc
atagaaaaatattcggatctgattccactgaccgttagtgcggatatgggaacatgtcca
cctcagattccactgaccgttagtggacatgatgtggttgatggcatggtcaaaatggaa
agtccagcaatagttcatcaacctgttaaacgcgtgcacaaattccacagtgatcctggt
tcccgtacaactaaaagtgtacatggtaggttttattttctggcattatattcaattttt
ttcgtactaaacagacgcttaatcattgtcctttataaaataattccaaaacttgccttt
tctcttttttatcctttccttgtatctggccttgtaaggatggggacatgtaagtatctc
acctgtattgcggacgaggatggggacatacctctacacacctgtattatcaaccaccag
ctggaggtcgtccacaacctactggatgtcatggaaactttgcccaatgctcagtccaag
atcaatgtccacaataggagactccagacaccattgcatcttgctgtgataactggccag
gaaggagtggttgatgcccttctcaaggcaggaggagaacccactgttcttgatcgtcat
ggtaacacagcagctcacttagcctcgctttacaaaaaggacaagtgtcttgcagcaatg
ctcaaatatatccggccgagagtcagcaggcagagacctttcccagaacttgacatcaag
aacattgatggtttgactccactccatatttctgcccaaaaagaggacttaacatccata
aaactattaataaagggcaaagctgatgtgaacatggctgatgggaaaagtggtcgaaca
gcccttcactacgcagcaggcagtgacgacctcgctactgctggctggctacttctagag
gccaaagctgcagtcaatgctacatgttttgatggcaacacatctcttcatgtggcttgt
ggccggcagaatgttggtatggtagccctcctgatggcagctggggctgacccaaaaatt
gagaacatggactacgaagatgagagttcagagaatgaaaatgaggatgagaaagacaaa
gatgagatgataagaaaggacaagtgtcagcgaggtcgtacagcagaggactttgcaatg
gacaatgataagattctaaaggtgttgtatggacacccctatacaagtatgagtgagatt
catgaggaggctgacaacagggaatatgagcaaacagctgagatgttcacctccctgtcc
ctggtgaaaggtgaacaggaggaaactggcctcagtagtataggtcccatcaccgacgga
ggtgacatggccagcatcacatatccacagagggtgaagctctcccagttgctggaccct
gacagggagggacaagactggcgctcactggcagacagacttggcttcagcaaactaatc
tcaggcagccagacaggacacagtcctacccgcatcctcttcacttactacgaggaatgt
ggtggaactgtaaagcgactgaaagatgcacttatggctttacacaggacagatgctgtc
aaactcttatctcacccagactccgaaactacagatgtccggaaggagaaaaccatatca
tctgagggcagcctaatagactctggactgaattcaaaaagtctgactctacattaa
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