Pecten maximus (king scallop): 117339564
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Entry
117339564 CDS
T07399
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117339564
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
117339564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_N
Rrn7_cyclin_C
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
117339564
NCBI-ProteinID:
XP_033757138
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Position
12:complement(3572361..3587618)
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AA seq
521 aa
AA seq
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MPSCTVCGENEFEARDGLFFCSMCMTQSQDLRQEEATETFMDMTNPGFKHLIRNKEHQSE
KKTVRRDKGRPWSCYEGFQIILKEQVKALIGLGADPKLKDIVFQLWCTYLAKINVAFTED
LEKINPLLKKFERHREKYPGTTEDPDIKPAMLHRMWKKKMTRSVADATADIENQDLQFSL
RNEDFYDEDNPFKSVNEKLDSDDEFDTDSNDSFYPEENDQSLSGLTRRSYTQHPGFMNMK
KTLAFCLLGLMYTNPITTAVDIVRWVHENEIPYEKASHLLPTDMKFGPYDTNTFHATLPV
SEETLRKDSGQMIKYLDLQDAPMTPITDLINKYLVVLELPGDLHGFVHTIQKLVEYEKRY
KYVSLPSYDSLAMAFIITTLEILIGLDGSTERKLSKISKKMGSLIPEVRLFVWDDWVCHT
NKKQKLTLTCLMSKTFDMRLLDNVEQVTASFRHARRRVGRHTEKQLSKKFQETSQNALLL
PLKMLSEKGESTMTAVDSTSRNQDDNENVMVSFSRNSQSGV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgccttcatgcactgtgtgtggagaaaatgagtttgaggccagagatggattatttttc
tgctccatgtgtatgacccagtcacaggacttgaggcaggaagaggcaactgaaacattc
atggatatgactaaccctggattcaagcatttgatacggaacaaggaacatcagagtgaa
aagaaaaccgttagacgtgataagggccgtccatggagctgctatgaggggttccagatc
attttaaaagaacaagtcaaagccttgatagggttaggggccgatcccaaacttaaggat
attgtgttccaactgtggtgtacctacctagcgaaaataaatgtggccttcactgaagac
ttggaaaagattaacccgctattgaaaaagtttgagcgacacagagagaagtatccagga
acaacagaagacccggacatcaaaccggcgatgttacacagaatgtggaagaaaaaaatg
actcggagtgttgccgatgctacagctgatattgaaaatcaagatttgcagttttccttg
aggaatgaagatttctatgatgaggacaatccatttaaaagtgttaatgaaaagcttgac
tcggatgacgaatttgacacagactccaatgacagcttttacccggaagagaatgatcaa
agcttgtcaggcttgacaagacggtcgtacacacaacacccaggatttatgaacatgaag
aagacattggcgttctgtcttctaggtctgatgtacaccaatccaataactacggcagtg
gatattgtcagatgggttcatgagaatgaaattccgtatgagaaggcctctcacctactt
cccacagatatgaagtttggtccctatgacaccaacacattccatgcaactttaccggtg
tctgaggaaaccctgaggaaggacagcggtcagatgattaagtatctagatcttcaggat
gcaccgatgacccctatcacagaccttatcaacaagtacctggtcgtcctggagctgcca
ggtgatctccatggttttgtacacacgattcagaagctggtggagtatgagaagcgctac
aagtacgtaagcttgcctagttatgacagtctagccatggcgtttataatcaccaccctg
gagattctgattggtctggacggttccacagagaggaaattgtcaaagatttctaagaag
atgggatccttgattccagaagttcgcctgtttgtctgggacgattgggtttgccacacc
aacaagaaacagaaactgacattgacttgtctgatgtctaaaacctttgacatgcgactg
ttggacaatgttgagcaggtgacggcgtcattcagacatgcccgacgacgggttggacga
cacacagaaaagcagctgtccaagaaattccaggaaacctcccagaatgcattacttctg
ccattaaagatgttgtcggagaagggggagtcaaccatgactgctgttgattctacttca
cgtaaccaggatgacaatgaaaatgtaatggttagcttctcacgaaacagccaatcaggc
gtctga
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