Pecten maximus (king scallop): 117339956
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Entry
117339956 CDS
T07399
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmax03016
]
117339956
Enzymes [BR:
pmax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
117339956
Transfer RNA biogenesis [BR:
pmax03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117339956
Prokaryotic type
117339956
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7618
Motif
Other DBs
NCBI-GeneID:
117339956
NCBI-ProteinID:
XP_033757571
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All DBs
Position
12:complement(19152715..19176403)
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AA seq
467 aa
AA seq
DB search
MSGAVLSCDAGAEVKEDIQQGPAKDDTPEITGEKRKLENDEVTTSVKREKTDVEPEAQTE
ATPLKRKKVALLLSYNGKGYFGLQRQKTLPTIEGALGKALLSVGVITKEDEDTPQKIRFQ
RAARTDKGVSAAGNLVSLKMSLHVENFLEEISKVLPQQIKVQACIRTTKAFDSKNFCDGR
TYSYLTPTFAFAPLKLAVTEKYRVPDDTIQRVRELIKRFEGTHNFHNFTSGLKPTEAKAK
RYIISFKCGEPFVRDDIEFVQLTVRGQSFMLHQIRKMIGLTMAIVRGHCEEDVINKTYSL
VKVDVPKAPGSGLLLEELHYQNYNRRYGHDGMHQSLDWTIYREAIEKFKEEHIYPEMIRS
EKEEHSMMTWLTTLEQHDYDEIPAEKLLNWKYKENKEHSKNEKSSSTENPETSEVKDTKS
SSTENEKDVSDQEQTKNSVELSTAAKDMVERSECMNDKNTDNKMEIL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggctgtattaagttgtgatgctggtgctgaagtgaaggaggacatccaacaa
ggtccagcaaaagacgacactccagaaattacaggcgagaaaagaaaacttgaaaatgat
gaagtgacaacatcagttaaaagggaaaagaccgacgttgaacctgaggcacaaacagaa
gcaacccctctgaaaaggaagaaggtagccctgctcttgtcttacaatgggaaaggatat
tttggtcttcagagacagaaaacgctgcctacaatagaaggagccctggggaaagcactc
ctcagcgtgggtgtgataacaaaggaagacgaggatacaccacaaaagattcgattccag
cgagctgcaaggactgacaaaggagtatcagcagcaggaaaccttgtctcccttaagatg
tctttgcatgtggagaactttttagaggaaatcagcaaggttttaccacaacagataaaa
gtacaggcttgtataagaacaacgaaggcatttgacagtaaaaatttctgcgatggaagg
acctatagctacctgacaccaacttttgccttcgctcctcttaaactggcagtcacagaa
aaatacagagttccagatgatactatccagagagttcgagaacttataaagagatttgag
ggaacacataacttccacaattttacttcgggattgaagccaacagaagccaaggctaaa
cggtacatcatcagttttaagtgtggtgaaccgtttgtacgagatgacatagagtttgta
cagctcactgttcggggacagagcttcatgcttcatcaaatccgcaaaatgatcggttta
actatggccattgtgaggggccactgtgaagaggatgtaatcaacaagacttattccctt
gtcaaggtagatgttccgaaggctccaggaagcggtctcttgttggaggagttgcattat
cagaactataataggaggtatggacacgatggcatgcaccaatctctggactggaccatt
tacagagaggcaatagaaaaatttaaagaggaacatatctacccagaaatgatcaggtct
gaaaaagaggagcattccatgatgacatggctgactaccctagagcagcatgactatgat
gaaatacctgccgaaaaattattaaactggaaatacaaagagaataaagaacacagtaaa
aatgagaaatcttcaagtactgaaaatccagagacatcagaggtaaaagacaccaaaagc
tcttctactgaaaatgaaaaggatgtgtcggaccaagaacaaaccaagaattctgtggag
ctgtcaaccgcagccaaggatatggttgagagatcagaatgtatgaacgataagaataca
gataacaagatggagatcttatga
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