Pecten maximus (king scallop): 117340357
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Entry
117340357 CDS
T07399
Name
(RefSeq) ATP-dependent DNA helicase Q1-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117340357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117340357
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117340357
Enzymes [BR:
pmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117340357
Messenger RNA biogenesis [BR:
pmax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
117340357
DNA repair and recombination proteins [BR:
pmax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
117340357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
117340357
NCBI-ProteinID:
XP_033758008
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All DBs
Position
13:3891956..3894314
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AA seq
456 aa
AA seq
DB search
MADFSTCLEFAKAKLKLDYDLKDKQIDTLRNVFIGSDCVSVLPTGYGKSVIFQLLPFLLQ
RKRQLQTPAIVIVVTPLSSIMEDQVYSLRDKGIKACFLNIDGKHASTYTDDKVSDDDDDD
DSCDIKLPKSVSMNDIKRGNYNLIYAHPETLINSKTCSSILRSSVYQANVGAVVIDEVHM
ITEWGENFRPAFKKLGETTCIFPEAAHLALTATATPKKINELCKILQYQQPQVVTVNPDR
PNIFLNIEKRLPNLHKFEKLDKIIEPIADGLKTQLGIFPVTIVYMESLEALSYCYQYISY
CLQELQYSGEQLPENRIFGQYHKDYTDDMKRHIVTELTKENPKIRLVLATVALGMGLNAP
SISQIIHCRPPTTIECYMQEIGRAGRNGQPASALLYYNNSDISKARKGMSDEMINYCKNE
TSCSRTFLVQYFGFEQVLFNKSPVECCSNCKKLIWD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttttccacgtgtttggagttcgcaaaagcgaaactgaaactagattacgat
ctgaaggataaacagatagatacactcagaaacgtgtttatcgggtcagattgcgtgtct
gtacttcccacgggctatgggaaaagcgtcatctttcagttgttgccgtttttgttgcaa
cggaaacgtcaactgcaaacaccagcgatcgttatagttgtaacccctttaagctccatc
atggaagatcaggtgtacagtttaagagacaagggtatcaaagcatgctttttaaatatt
gatggaaaacatgcgtctacatacactgatgacaaagttagtgatgacgatgatgacgat
gattcatgtgatataaagttgcctaagtctgtgtccatgaatgacatcaagagaggaaat
tataatttgatatacgcacatccggagacgttaatcaatagtaagacatgttcctctatt
ctccgatcttccgtgtaccaggcaaacgtgggggcagttgtaatcgacgaggtacatatg
attacagaatggggagagaatttcagacccgcttttaaaaaactgggtgaaacaacatgc
attttcccagaggctgcacacctggcacttaccgccacagcaacaccaaagaaaataaac
gaactatgtaaaatattacaataccagcagcctcaggtggtcactgtcaatcccgacaga
ccaaacatctttttaaatattgaaaaaaggctaccaaatctccacaaatttgaaaaattg
gacaaaataattgaacctattgccgacggactgaagactcaattaggaatctttcctgta
acaattgtgtatatggagagcttagaagctctcagttactgttatcagtatatatcgtac
tgccttcaggagttacaatacagtggtgaacaacttcctgagaaccggatcttcggtcag
taccacaaagactacactgacgatatgaaaagacacatagtcactgaacttacaaaggaa
aatcctaaaattagactcgttctggccacagttgcattaggtatgggtttaaatgcaccg
tcaatatcacagatcattcactgtagaccaccaactaccattgaatgctatatgcaggaa
atcggccgtgctgggagaaatggtcagccagctagtgcccttctttactacaacaacagt
gacatttcaaaggctcgaaaaggcatgtctgacgaaatgataaactattgtaaaaatgaa
acctcatgttctcgtacatttttggtgcagtattttgggtttgaacaagtgcttttcaac
aaatcacctgttgaatgttgttcaaactgtaaaaagctgatatgggactga
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