Pecten maximus (king scallop): 117341923
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Entry
117341923 CDS
T07399
Name
(RefSeq) putative ATP-dependent RNA helicase Pl10 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117341923
03041 Spliceosome [BR:
pmax03041
]
117341923
03036 Chromosome and associated proteins [BR:
pmax03036
]
117341923
Enzymes [BR:
pmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117341923
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117341923
mRNA cycle factors
Common to processing body (P body) and stress granule
117341923
Spliceosome [BR:
pmax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117341923
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117341923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117341923
NCBI-ProteinID:
XP_033759680
LinkDB
All DBs
Position
14:complement(18379751..18407873)
Genome browser
AA seq
784 aa
AA seq
DB search
MSNVPTQNVQGLEQQFAGIDINAGRPYSGNRGDNFSHGGPKYRPNNVNPRFQEQTFYHQG
PPPNVPPPTGSRYVPPHQRDGAPVPPPGSFPPATDGGGPGGYGGYNNQGRGGYNMNGMPP
QSFNQPNISDGRGGYNNYNRGGYQGNYGGQGGGNFNSFNRRGGGQGGYQANGGGRYNGRG
GGSSDRGMRQGSMPPHQNHPPPGNSRWDNLDDDRGSREQRAGSAPSQNWNNQGNRWDNRT
ECSVVTNSRWAPEPTKENWNVALQRNDRLELELFGGGNTGINFDKYEDIPVEATGESCPK
HIESFEETELGEIIRNNIVLSKYAKPTPVQKYSIPIVLSKRDLMACAQTGSGKTAAFLVP
VLNRVYDNGPGDAPVQNNQGRYSRRKQYPVALILAPTRELASQIYDEARKFAYRSRVRPC
VVYGGADIGAQIRDLDRGCHLLVATPGRLVDMIERGKIGLDYCKFLVLDEADRMLDMGFE
PQIRRIVEKDTMPPSGTRQTLMFSATFPKEIQILARDFLDNYIFLAVGRVGSTSENITQK
VVWVEEGDKRSFLLDLLNAAAGPDALTLTFVETKKGADALEDFLIMEGYPATSIHGDRSQ
KEREEALRQFRNGDRPILVATAVAARGLDIPNVRHVVNFDLPSDIEEYVHRIGRTGRVGN
LGLATSFFNDKNKNIIRDLMDLLVEAHQEVPSWLESMAYDARPSGPASRRGGRRFGGTGF
GARDYRQQNKAKPSNPGYGNFAGSAPATTGYNQFNANYGNYGGSYGGSYGGAPAGNSGPD
WWGN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgttccaactcaaaatgtgcagggtctagaacagcaatttgctgggatagac
atcaacgcaggtcgcccctacagtggtaacaggggagataacttcagtcatggtggacca
aaatatcgacctaacaacgtaaaccccagatttcaggagcaaacattctaccatcaagga
ccacctcctaatgtgccaccaccaactggtagtcgttatgttccccctcaccagcgagac
ggtgctccagtacccccaccaggcagcttcccaccggcaactgacggtggtggtccaggt
ggctatggaggctacaacaaccagggccgcggtggatacaacatgaatggaatgcctccc
cagtccttcaaccagcccaacataagtgatggacgtggtggatacaacaactacaaccgt
ggaggttaccaaggcaactacggaggtcaaggtggcggaaacttcaactccttcaaccgt
cgtggaggaggacaaggaggttaccaggccaacggaggcggaagatacaatggccgcgga
ggaggtagtagtgacagaggtatgagacagggaagcatgcctccacaccagaatcatcct
ccacctggcaactctcgctgggacaatctggacgatgaccgtggctcaagagaacagagg
gctggcagtgcaccctcccagaactggaataaccagggtaaccgctgggacaataggaca
gagtgcagcgtagtgaccaacagtcgctgggccccagaacctactaaagagaactggaat
gtggctcttcagaggaacgatcgtctggaattagagctgtttggtggtggtaacactggt
atcaactttgacaaatatgaggacatcccagtcgaggctacaggagaaagctgtcccaag
cacattgaatcttttgaggaaacagagctgggtgagatcatccgaaacaacattgtcctg
agcaagtatgctaagcctaccccagtacagaagtactctatcccaatcgttctgtccaaa
cgtgacttgatggcttgtgcccagactggatcgggaaagactgctgctttcttggtgcca
gtgttgaaccgtgtgtatgacaatggaccaggtgatgcacctgtacagaacaatcagggg
cgctattcccgaaggaagcagtatcctgttgctttaatcctggcccctactcgtgagttg
gcctcacagatatatgatgaagctcgcaagtttgcatatagatcacgtgttcgtccttgc
gtagtgtatggaggagctgacattggtgcccagatccgtgaccttgaccgtggctgtcac
ctgctggtggccaccccagggcgtcttgttgacatgattgaacgaggcaagattggtctt
gactactgcaagttcttggttttggatgaagctgacagaatgttggacatgggttttgag
ccccagattcgtagaattgttgagaaagatactatgcctccttctggcaccagacagaca
ctcatgttcagcgccacctttccaaaggaaatccagatcctagcccgtgacttcctggac
aactacatcttcttggctgtgggcagagtgggtagtaccagtgagaacatcacacaaaaa
gtagtctgggtggaggagggcgacaaacgctccttccttcttgatctccttaatgctgca
gctggacccgatgccttgacactgacatttgtggaaactaaaaagggtgctgacgccctg
gaagacttcctcatcatggaaggctaccctgccactagcatccatggagatcgttcacag
aaggagagagaagaagctctgcgacaattcagaaatggcgacagacccatacttgttgct
actgctgttgctgctcgaggattggacatccctaatgtccgtcatgttgtcaactttgac
cttccaagtgacattgaggaatatgtccacagaattggtagaactggacgtgtcggaaac
ttgggactggccacatccttcttcaacgacaagaacaagaacatcatccgtgacctgatg
gatctgcttgttgaggctcaccaggaagtcccatcatggcttgaatccatggcttatgat
gcccgcccatctggacctgctagtcgtcgtggaggacgcagattcggtggcactggattc
ggagcacgtgattatcgtcaacagaacaaggcaaagccatcaaatcctgggtacggaaac
tttgctggcagcgcgccggcaacaacagggtataaccagttcaatgccaactacggaaac
tacggcggatcttatggaggctcatatggcggggctcctgccggtaacagtgggccagac
tggtggggaaactaa
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