KEGG   Pecten maximus (king scallop): 117342063
Entry
117342063         CDS       T07399                                 
Name
(RefSeq) replication factor C subunit 4-like isoform X1
  KO
K10755  replication factor C subunit 2/4
Organism
pmax  Pecten maximus (king scallop)
Pathway
pmax03030  DNA replication
pmax03410  Base excision repair
pmax03420  Nucleotide excision repair
pmax03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117342063
   03410 Base excision repair
    117342063
   03420 Nucleotide excision repair
    117342063
   03430 Mismatch repair
    117342063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmax03032]
    117342063
   03036 Chromosome and associated proteins [BR:pmax03036]
    117342063
   03400 DNA repair and recombination proteins [BR:pmax03400]
    117342063
DNA replication proteins [BR:pmax03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    117342063
  DNA Replication Termination Factors
   ELG1-RFC complex
    117342063
Chromosome and associated proteins [BR:pmax03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    117342063
DNA repair and recombination proteins [BR:pmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     117342063
  Check point factors
   HRAD17(Rad24)-RFC complex
    117342063
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_assoc_2 AAA_lid_RFC1 AAA_11 AAA_16 AAA_30 Mg_chelatase Gp44_lid AAA_24 ResIII SLFN-g3_helicase DNAX_ATPase_lid AAA_19 RuvB_N DUF815 AAA_7 AAA_5 bpMoxR
Other DBs
NCBI-GeneID: 117342063
NCBI-ProteinID: XP_033759928
LinkDB
Position
14:33783332..33795098
AA seq 361 aa
MHAFLKGGSAALERAKEKSASSSADKEEQSKKTRQVPWVEKYRPRSVDDVAYQDEVVAVL
KKSLQCSDLPNLLFYGPPGTGKTSTILAAARDLFGPEMFKNRVLELNASDERGIGVVRDK
VKRFSQQTASGTRPDGKPCPPFKIIILDEADSMTSPAQAALRRTMEKETKTTRFCLICNY
VSRIIEPIASRCAKFRFKPLSEDTLTKRLKGICDKESISCDDEGIKALLRTSEGDLRKAI
TYLQSASRLKTEETITEADINEIAGVVPDQTLDDLIVVCSSDSYEKLDAGIQGLINDGHS
ASQVITQMHEKLIEKEDLSDKQKAVVFEKLAVVDKCLMDGADEYLQLMALFTTIMHQVCH
G
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcatgcatttttgaaaggaggcagtgctgctttagaaagagccaaggagaaatcagct
tcttccagtgctgataaagaagaacaatctaaaaagaccagacaggttccgtgggttgaa
aaataccgacctcggagtgtggatgacgtagcttaccaagatgaagtagtggcggtcctt
aagaagtctttacagtgttctgatctgccgaacctccttttctatggtccccctggtaca
ggtaaaacttcaactattcttgctgctgccagagatttgtttgggccagaaatgttcaaa
aatagagttttggagttgaatgcttctgacgagagaggaattggcgtggttcgagataag
gtgaagaggttttcacagcaaacagccagcggtacacgaccagatggcaaaccgtgcccg
ccatttaaaatcattatcctggatgaagctgattccatgacttctcctgcacaggccgct
ctaagaagaacaatggagaaagaaaccaagacaacacgattttgtctgatctgtaattac
gtcagccgaatcatagagcctatcgcttccaggtgtgccaagttccgttttaaaccattg
tccgaggatacgctgacaaagaggttaaagggcatctgtgacaaggaaagcatcagctgc
gatgacgaggggatcaaggctctgctaagaacatctgaaggagatttgagaaaggctatc
acatatctacaaagtgcttcaaggcttaaaacagaggaaactattacagaggctgacatc
aacgaaatagcaggggttgttcctgaccagaccttggacgacttgattgtagtgtgtagc
tcggactcgtacgagaaactggacgcgggcatacagggtctgattaatgacggtcactcc
gcctcacaggtcatcacacagatgcatgagaaactgatagaaaaggaggacctatctgac
aaacagaaggcagtcgtctttgaaaagctggcggttgttgacaaatgtttaatggacgga
gctgatgagtatctacagttgatggctctctttacaacaatcatgcaccaagtctgtcac
ggatga

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