Pecten maximus (king scallop): 117342347
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Entry
117342347 CDS
T07399
Name
(RefSeq) ATP-dependent RNA helicase eIF4A-like isoform X1
KO
K03257
translation initiation factor 4A
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117342347
03012 Translation factors [BR:
pmax03012
]
117342347
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmax04147
]
117342347
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117342347
mRNA cycle factors
Stress granule specific factors
117342347
Translation factors [BR:
pmax03012
]
Eukaryotic type
Initiation factors
eIF-4
117342347
Exosome [BR:
pmax04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117342347
Exosomal proteins of bladder cancer cells
117342347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
117342347
NCBI-ProteinID:
XP_033760380
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All DBs
Position
14:17284897..17293762
Genome browser
AA seq
493 aa
AA seq
DB search
MSLSKAEVRTETSQSLRDQGKGYGFRGEGERSPPRRNKKFRKPSPEFWDDGAGRCAGHVP
SEGYPKNSEGTAWADEDPNGYTNLHNERSQKEAEEQYQDGGIQPIVQTSENNDYVVDVIE
SFDDMNLNEPLLRGIYAYGFEKPSAIQQRAIKPCIDGVDVIAQAQSGTGKTATFSVAILQ
KLDVNSKYCQALVLAPTRELAQQIQKVVVALGDYMNASCHACIGGTNVQADVAKLKAGVQ
IIVGTPGRVYDMIQRKALDPSTIDLFILDEADEMLSRGFKDQIYDIFRFLKESIQVILLS
ATMPSEVLEVTTKFMRDPVRILVKKDELTLDGIKQFYVNVEKEEWKLDTLCDLYETLTIT
QAVIFCNTRRKVDWLTEKMLARDFTVSSMHGEMDQKERDVIMREFRTGSSRVLITTDLLA
RGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFITSEDKRPLKDIEQFYNT
NIEEMPMNVADLI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttcaaaagctgaagtgagaacagaaacctcccaatctcttcgggaccaggga
aaaggttacggatttcggggggagggtgagcgtagcccaccaaggcgaaacaaaaagttt
cgaaagccctctcctgaattttgggatgatggagctgggagatgcgcgggacacgtccca
tcggagggctaccctaaaaactccgaggggacagcttgggctgacgaggacccgaatggc
tatactaatctccataacgaaaggtctcaaaaagaggctgaagagcaatatcaggatgga
ggtattcagccaatcgtccagacctctgagaacaatgactatgtggtggatgtcattgaa
agcttcgatgatatgaacttgaatgaaccattgctcagaggaatttatgcctatggtttt
gaaaagccttccgctattcagcagagagccatcaaaccctgtattgatggagttgatgtg
attgcccaggcccagtctggtacaggaaaaactgctaccttctccgtagcaatccttcag
aaacttgatgtaaacagcaaatactgccaggctttggtcctggctccaactagagagttg
gcacagcagatccaaaaggtggtggtcgctcttggagactacatgaatgcctcctgtcat
gcttgtattggtggtaccaatgtgcaggctgatgtagccaagctgaaggcaggtgtacaa
attatcgtcggcaccccaggccgagtctacgatatgatccagcgcaaagcattggatccc
tcaaccattgaccttttcatcctggatgaggctgatgaaatgttgtccagaggtttcaag
gatcagatctacgacattttcaggttcttgaaagaatctatacaggtcatcctgttgtct
gctacaatgcctagtgaggttttggaagttacaaccaagttcatgcgggatcctgtccgc
atcttggtgaaaaaagatgaacttacccttgatggtatcaaacagttttatgtcaatgtc
gaaaaagaggagtggaagcttgacaccctctgtgacttgtacgagacattgacaatcaca
caagctgtcatcttctgtaacacgagaaggaaggtggactggctcaccgagaagatgttg
gcaagagatttcactgtctcatccatgcacggagagatggatcaaaaggaacgtgacgtg
attatgagggagttccgtactggctctagccgagttctcatcactacagatctgttggcc
agaggtattgatgttcagcaggtgtccctggtcatcaactacgatctccccgctaacagg
gaaaactacatccacagaatcggtcgtggtggacgattcggacgtaaaggagtggcaata
aacttcatcacatcggaggataaacgtccattgaaggacattgaacaattttacaataca
aacattgaggaaatgcctatgaatgtagcagatttgatctag
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