Pecten maximus (king scallop): 117343074
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Entry
117343074 CDS
T07399
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04382
Cornified envelope formation
pmax04512
ECM-receptor interaction
pmax04518
Integrin signaling
pmax04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117343074
04518 Integrin signaling
117343074
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117343074
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117343074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmax04147
]
117343074
00536 Glycosaminoglycan binding proteins [BR:
pmax00536
]
117343074
Exosome [BR:
pmax04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117343074
Glycosaminoglycan binding proteins [BR:
pmax00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117343074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
117343074
NCBI-ProteinID:
XP_033761254
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All DBs
Position
2:complement(40443594..40459476)
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AA seq
950 aa
AA seq
DB search
MAEAKHLLFCFVWLAVDLLSIDAQPPQTNFVPQGNPFGNGPNAWDPNMLRFQNQFPVMPF
SQSPGPVSNFQMGGGGNNMPGPPGGRGGRSWNPQMGSNSMGNFRVLPANMADSLRSRARM
FSNQQFSQASPGNLLPFVGAPPPGGNMQPGQTAFGGALDLSTMPNFSDRFGLAWGNELLR
QLSPQPDSEAPSSFGGSGSSPNANNNNAQQGGQTSNQPNGGPGGFGNMMPPNGMMPPNGM
MPPNGMMPPNGMMPFRSQSPFPGIPDITQMNRGNQINPGQNPGGSFPGMQPGQMPPGMNP
GNSNNGFPQFGGGNTNTGSQNPNIPGQFPSPWMGSQPNMLNQQGNQGMNRNGMPGGNGMP
GMPGMNAMQGMNGNAGTNGMPGMPGMNGMPGMNGMPGMPGMNGGMPGMPGMNGGMPGMPG
MNGGMPGMNGMPSMNGRPGMQGMNGGPGNNNMPGGGMNGMPMNNMQGGNTMPSGMNTIPG
ASNGMSSGMNGMPAGMNNLPGGMNSMPGGMNSMPGGMNSMPGGMNSMPGGMNSMPGGMNS
MPGGMNNMPGGMNSMPGGMNNRLPTNNGMSGGMNNGMQGGVMNGPNGMPGMNGMPGMNGM
PGMNGMPGMNGMPGMNGMPGMNNMPGMNGISGAQNQGNNQFPGFPNFQGNVGTGNPMPGG
GMPPGNNQQMGFQPPQSPQPFNPSQFQPAFPGMTPQGGPGAQNTINNQGGSNGSPFPQNP
AFPQNPSFPANGGLNSQQSGSSNPLGSSLQFPLGGTPSQNQFGAGLNGLAGTNAGTPSTA
GSGNNPQGEGDMVTTITDHDGRVLWRSDGQVTRTEIMTAIERLANSDNSSPAAAASALPS
GAQFLGGSVGTSAASNPGLESGAASQNGITFGTVGSNTNPIQNFPFQTSPNQVDPMSTTV
HSFVDNPNRPNPSAGSRGGLFEQFLSGGGGQGQQNNNAGSGTGNRNPFSL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcaaaacacctcctgttctgcttcgtatggcttgctgtggatttattatca
atagatgctcaaccgcctcaaacaaacttcgtaccacaagggaatccatttggtaacgga
ccaaatgcctgggatccaaatatgttgcggtttcaaaatcaatttcctgtgatgccattt
agccaatcaccgggtcccgtgtcgaactttcaaatgggtggtggaggtaataacatgcca
ggtcccccgggtggcagaggagggagatcgtggaatccacaaatgggatcaaattcaatg
gggaatttcagagtccttcctgcaaacatggcggacagtttacgtagcagagctaggatg
tttagcaaccaacaattttcgcaggcgagcccaggtaatttgttaccattcgtgggtgca
ccgccacctggtgggaacatgcaaccaggccagacagctttcggtggagcactggactta
agtacaatgccaaatttctcggatagattcggtctcgcgtggggaaacgaattgctaaga
cagctgtcaccacaaccagatagtgaagcgccgtcgtctttcgggggatcaggttcttca
cctaacgcaaacaacaacaatgctcagcagggtggacagacaagtaaccaaccgaacggt
ggacctggcggattcggaaacatgatgccaccgaatggaatgatgcctccaaatggcatg
atgccaccgaatggaatgatgcctccaaatggcatgatgccgtttcgatctcagagccct
ttcccaggaataccagatattactcaaatgaatcgaggcaaccaaataaatccagggcaa
aatccaggcggaagttttcctggaatgcaacctggacagatgccacctggtatgaatcct
ggaaattctaataatggatttccacaattcggagggggaaatacaaatacaggatcacaa
aatcctaacattccaggccaatttccttcaccctggatgggctcgcaaccaaatatgtta
aatcaacagggaaatcaaggaatgaatagaaatggcatgcctggtggtaatggaatgcca
ggaatgccgggtatgaatgccatgcaaggaatgaatggaaatgcaggcacaaatggcatg
cctggtatgccaggaatgaacggaatgccaggaatgaatggaatgccaggtatgcctgga
atgaatggcggaatgccaggtatgcctggaatgaatggcggaatgccaggtatgcctgga
atgaatggcggaatgcctggaatgaatggtatgccgagtatgaatggaagaccaggtatg
cagggaatgaacggcggaccaggaaataataatatgccaggaggtggaatgaatggcatg
ccaatgaacaatatgcaaggaggaaatactatgccatctggaatgaatactataccaggg
gcgtcaaatggtatgtctagtggaatgaatggcatgccagctggaatgaacaatctacca
ggtggaatgaacagcatgccaggtggtatgaacagcatgccaggtggaatgaacagtatg
ccaggtggtatgaacagcatgccaggtggaatgaacagtatgccaggtggaatgaacagt
atgccaggtggaatgaacaacatgccaggtggaatgaacagcatgccaggtggaatgaac
aacagacttccaacaaacaatggcatgtcgggaggaatgaataatggcatgcaaggagga
gttatgaatggtccgaatggaatgccaggcatgaatggaatgccgggaatgaatggaatg
ccaggaatgaatggaatgccaggaatgaatggaatgccaggaatgaatggtatgccagga
atgaataatatgcctggaatgaatggaatatccggagctcagaatcaaggcaataatcaa
tttcctggatttcctaatttccagggaaatgtaggcacaggaaaccctatgccaggtggt
ggcatgccaccaggaaacaatcagcaaatgggatttcagcccccacaaagtccacaaccg
ttcaaccccagtcaattccaaccagcatttcccggcatgacaccacaaggcggacctggt
gctcagaatactatcaataatcaaggaggttcaaatggatcccctttccctcagaatccc
gcatttccccaaaacccttcttttccagcaaatggcggtttgaactcacaacaaagcgga
agttctaatccactaggcagttcactacagtttccattaggaggaacacccagtcagaac
cagtttggcgcgggtttaaatggattggccgggactaacgcagggaccccttccacagca
ggctcaggtaataatccacaaggagagggtgacatggtcacaacgataactgatcatgac
ggacgggttttatggcgaagtgacggtcaagttaccagaacagaaataatgacagcaatc
gaaagactcgccaatagtgacaatagctccccagctgctgctgcttctgcactaccgtct
ggtgctcagtttcttggtggcagcgttgggacaagtgctgcttctaacccaggtctagaa
tcaggggccgctagtcagaatggtatcacatttggaacagtaggttctaatactaatcca
atccaaaatttcccatttcaaacttcaccaaatcaggttgatccgatgagcacaacagtt
catagcttcgtggataacccgaatcgaccgaatccttcagcagggtcacgaggcggtttg
tttgaacagttcctgtccggaggaggcggacaaggtcagcagaataacaacgctggcagt
ggaacagggaaccggaatccattcagtctatag
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