Pecten maximus (king scallop): 117343229
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Entry
117343229 CDS
T07399
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117343229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117343229
03016 Transfer RNA biogenesis [BR:
pmax03016
]
117343229
03012 Translation factors [BR:
pmax03012
]
117343229
04131 Membrane trafficking [BR:
pmax04131
]
117343229
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmax04147
]
117343229
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117343229
Transfer RNA biogenesis [BR:
pmax03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117343229
Translation factors [BR:
pmax03012
]
Eukaryotic type
Elongation factors
117343229
Membrane trafficking [BR:
pmax04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117343229
Exosome [BR:
pmax04147
]
Exosomal proteins
Proteins found in most exosomes
117343229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
117343229
NCBI-ProteinID:
XP_033761459
LinkDB
All DBs
Position
15:15484673..15545537
Genome browser
AA seq
460 aa
AA seq
DB search
MPLKRHINIVVIGHVDSGKSTTTGHLIYKCGGIEKRTIEKFEKEAAEMGKGSFKYAWVLD
KLKAERERGITIDIALWKFETPKYIITVIDAPGHRDFIKNMITGTSQADCAVLIIAAGTG
EFEAGISKNGQTREHALLAYTLGVKQLIVAVNKMDSTEPPYSEARFTEIKQEVSAYIKKI
GYQPKSVVFVPISGWHGDNMIGESNNMSWFKGWAIERKDGNANGKTLLQAIDSILPPERP
TDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPQNLTTEVKSVEMHHESLSE
ASPGDNVGFNVKNVSIKEIKRGNVAGDSKHDPPKGAESFSAQVIIINHPGEIHAGYSPVL
DCHTAHIACKFAELNLKVDRRSGKVLEKNPKCVKSGDACIAELVPSKPMCVECFKDYAPL
GRFAVRDMKQTVAVGVIQSVKKKEVSGKTTKAAVKAGGKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgccgctaaaacgccatatcaacattgtggtcattggccacgtggattcagggaagtcc
acaaccacggggcacttgatttacaaatgtggcggtattgaaaaacgaaccattgagaaa
tttgagaaggaggcggctgagatgggaaagggatctttcaaatatgcctgggttctggac
aaactgaaggcagaacgtgaacgtggaatcaccattgacattgctctgtggaagtttgag
acaccgaaatatattataacggtcattgatgctcctggccaccgggatttcatcaaaaat
atgatcacaggaacatcccaggcggactgtgccgttctcattatcgctgctgggacagga
gaatttgaggcgggtatctccaagaatgggcagactcgtgagcacgctctactggcttac
actctcggggtcaaacagttgatcgtagctgtcaacaagatggactctacagagccgcca
tactctgaggcgcgctttaccgaaattaaacaagaagtaagcgcatatatcaagaaaatc
ggttaccagcccaaatcggtggtgtttgtgccaatctctggatggcatggggataacatg
atcggggagagtaataacatgtcgtggtttaaaggatgggccattgaaagaaaagatgga
aacgcaaatggcaagacccttttacaagctattgattcgatacttccacctgaacgccca
acggataagcccctacgtttgcctcttcaggatgtttataagattggaggtattggaact
gttccggtgggaagagtagagactggagtaatcaaaccaggaatggtggtcacatttgct
ccacaaaatctgacaacggaagttaaatctgtggaaatgcaccacgagtcattgagtgaa
gcatcaccaggagacaacgttggatttaacgtaaagaatgtctctatcaaggagatcaaa
cgtggaaacgtagccggggacagcaagcatgacccgccaaagggagcggaaagtttctcc
gctcaggtgatcatcataaatcaccccggggagatccacgctggctacagtcccgttctt
gattgtcacactgcacatattgcctgcaaatttgccgaattaaacttgaaagttgatcgt
cgatctggtaaagttttagaaaaaaatcccaaatgtgtaaaatccggcgacgcctgcatt
gctgagctggttccgtcaaagccgatgtgcgtagagtgtttcaaagattacgctcctctt
ggccgctttgccgtccgtgatatgaagcaaactgttgctgtgggggtcatccaatcggta
aaaaagaaggaggtctcgggtaaaacgaccaaagctgctgttaaagcaggaggcaagaaa
taa
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