Pecten maximus (king scallop): 117343344
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Entry
117343344 CDS
T07399
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23-like
KO
K07937
ADP-ribosylation factor 1/2
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117343344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmax04131
]
117343344
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmax04147
]
117343344
04031 GTP-binding proteins [BR:
pmax04031
]
117343344
Membrane trafficking [BR:
pmax04131
]
Endocytosis
Lipid raft mediated endocytosis
GRAF1-dependent endocytosis
117343344
Arf GTPases and associated proteins
Arf GTPases
117343344
Endosome - Golgi transport
117343344
Exosome [BR:
pmax04147
]
Exosomal proteins
Proteins found in most exosomes
117343344
GTP-binding proteins [BR:
pmax04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Arf [OT]
117343344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
SRPRB
Ras
G-alpha
Gtr1_RagA
MMR_HSR1
GTP_EFTU
6PF2K
FLAD1_M
DUF4130
Motif
Other DBs
NCBI-GeneID:
117343344
NCBI-ProteinID:
XP_033761576
LinkDB
All DBs
Position
15:26128372..26140886
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AA seq
408 aa
AA seq
DB search
MGAFASLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI
SFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLNEDELRDAVL
LVFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWVSNQLKGRK
SVTGLLVGFKSSLNRAADNWGQQADQFFSFVRYQATAPSIFLNLKVVVMGAFASLFKGLF
GKQEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDK
IRPLWRHYFQNTQGLIFVVDSNDRERAGEAREELNRMLNEDELRDAVLLVFANKQDLPNA
MNAAEITDKLGLQSLRNRNWYIQATCATSGDGLYEGLDWLSAQLKGRK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgtttgcatctctgttcaaaggactatttggtaaaaaggagatgaggatatta
atggttgggttggatgctgctggtaaaacaacaattctgtacaaattaaagctcggagaa
attgttacaaccatcccaactataggtttcaatgtcgagactgtagaatacaaaaacatt
agttttactgtgtgggatgttggtggtcaggacaagatcagacctctgtggagacattac
ttccaaaacacacaaggattgatatttgtggtggatagcaatgacagagagcgtgtagga
gaggccagagaagagctgatgaggatgttaaatgaagatgagctaagggatgcagtgtta
ttggtgtttgcaaacaaacaggatctgccgaatgccatgaatgcagcagagatcactgat
aaacttggactccacagcctgagaaacagaaactggtacattcaagcaacatgcgccaca
agcggtgacggtctatacgagggacttgattgggtatccaatcaacttaagggtcggaaa
tcagtcacaggtttgttggtgggtttcaaatcaagtttgaaccgagctgcagacaattgg
ggccaacaggcagaccagttcttcagttttgttcgctatcaggccaccgctccatcaata
ttccttaacttgaaagtagtagtcatgggtgcatttgcatctctgttcaaaggacttttt
ggcaaacaggagatgaggatattaatggttgggttggatgctgctggtaaaacaacaatt
ctgtacaaattgaagcttggagaaattgttacaaccatcccaactataggtttcaatgtc
gagactgtagaatacaaaaacattagttttactgtgtgggatgttggtggtcaggacaag
atcagacctctgtggagacattacttccaaaacacacaaggattgatatttgtggtggat
agcaatgacagagagcgtgcaggagaggccagagaagagctgaataggatgttaaatgaa
gatgagctaagggatgcagtgttattggtgttcgcaaacaaacaggatctgccgaatgcc
atgaatgcagcagagatcactgataaacttggactccaaagcctgagaaacagaaactgg
tacattcaagcaacatgcgccacaagcggtgacggtctatatgagggacttgattggtta
tccgctcaacttaagggtcggaaatga
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