Pecten maximus (king scallop): 117343349
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Entry
117343349 CDS
T07399
Name
(RefSeq) PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117343349
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117343349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
HMG_box
HMG_box_2
HMG_WDHD1
FANCD2OS
Motif
Other DBs
NCBI-GeneID:
117343349
NCBI-ProteinID:
XP_033761581
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All DBs
Position
15:complement(26830147..26852581)
Genome browser
AA seq
1003 aa
AA seq
DB search
MAKSESRMRELPQSTVRLLGSSQVITSVYSVVKELLENSIDAGSTSVDVKLENFGLDKIE
VRDNGDGIPKADIPFVARRYHTSKLSAFSDLEQLNTYGFRGEALGSLCTVADLSLTTRTK
DDDISLTYTFGKEGEITDTKPSHLSQGTTLLAAHLFKNLPVRRQFYNNVKKNKEELKKVE
MIVMAFGLIFPKIRITLRHNKDLIWQKNPVQDLRASVTGTLGKNFLNQMEYKNFKELDPE
IAVEMYVPSRDSDPQVTSRSTADRCFIYVNSRPVILKDIEKLLKQYYTSSHSCEGTRVPI
CCVSIVLPSSEIDVNLDPNKTRVMLHHQVSVANVIRNLLEEVYGPVEHSSEGIRQKSKMD
SSMNPDQSSEWSMDLTKDDERDDRSTKITAVENAEKCNGQNMPIFKVTMETVDNSQSENV
LGSDQVITEGIEFCHRKESLLEDSDEYSNRIMRGDDNSELEVPIVPTNIITPPIESTNRQ
GKVTVDNEEIVQIQKGCFDIVGDCFKDVLSDDESLCTLKGGITDSQTKGDNSYMKGDKPD
SQPETVLQETNSDLFDDSLTDMLINLDKESEKEMSMVNSTLKQSENNSRSGGDTYSFPVM
LLSAGSSKRPLTSPPDLSTPSKKRHIMSEENQPTLYDMVSGQPVQRGQGKIGYSSFVTEN
RSQVIAKNPTARFDEVIDLLKQQWENLSQEDQQKYDNNCLEKPEYDSPRENISSKKAGKH
LGNKMKLKSKPIPAGVSIKDQLMLAAKRSKSRRETGISFSMIKLQNTYLRQLNTSQYPKT
STLNLIGHLKSCGTWTCCLGEKICIFNCHRVQETVLYHQLMSDHVLSVTPLEQPIKLNAQ
NIGGKDQWDCLMSLDSNRFPGDIYSFITDERIVDNGFKVRCYTDNETGTSQADVVAMTAF
IPVYGIPDLAEVLELISTTEAETVSRCRPLKVLNYLQGEAVRMARKLPPLLDREEVLELQ
DQMSTILPDGCHVCLHDRPFCHPIYDMDDLPQTQSGATQEVLS
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctgaatcacggatgcgagagcttccccagtccacagtcaggcttctggga
agttctcaagtgataacgtcagtttatagcgtcgtgaaagaattgcttgaaaactcgatt
gatgccggatcaacatctgtggatgtcaaattggagaattttggtctggataaaatcgaa
gtaagagacaatggtgatggaataccaaaggcagacatcccttttgttgctaggcgttac
catacatctaaactttccgcattctctgatcttgaacaactgaatacctatggattccga
ggagaggcattgggttcattgtgtacagttgctgatctttctttgacaacgagaacaaaa
gatgatgacatcagtttgacatacacctttggcaaggaaggggagataacagacaccaag
ccgtcacatctcagtcaaggtaccacattattggcagctcatctgtttaagaatcttcct
gtaagacgacagttttataacaatgtaaagaaaaataaagaggagctaaagaaagtggaa
atgatcgtgatggcttttggactgatctttccgaaaatcaggatcactcttcgtcataac
aaagaccttatatggcagaaaaatcctgttcaagatctccgtgcctctgtcactggaact
cttggcaaaaatttcctcaaccaaatggaatataagaattttaaggaattagatccagag
atagctgtagaaatgtatgttcctagccgtgacagtgatcctcaggtgaccagtcgatcc
actgctgaccgttgctttatttacgtcaactcacgaccagtcattctcaaagacattgaa
aagctgttgaagcaatactacacctcctcacattcatgtgaaggaacacgagtgccgatc
tgctgtgtgtcaattgtgctgccatctagtgagattgatgtgaaccttgaccccaacaaa
acacgagtaatgcttcatcatcaggtctctgttgcaaatgtcattagaaatctgcttgaa
gaagtctatgggccagtagaacattccagtgagggtatcaggcagaaatcgaagatggat
tcgtccatgaaccctgatcagtcctcagagtggagtatggacttaaccaaagacgatgaa
cgggatgacagatctacaaaaataactgctgtagaaaatgccgaaaaatgtaatggacag
aacatgcctatttttaaggttaccatggaaacagttgataatagccaatcagaaaatgtt
ttaggatcagatcaggttattactgaaggtattgagttttgtcatagaaaggaatcactt
ttggaagacagtgatgaatattcaaatagaattatgagaggagatgataattcagaactt
gaagtaccaatcgtacctactaatattataacgccacctatcgagagtactaatagacaa
gggaaagtaactgttgataatgaagaaattgttcagatacagaaaggttgttttgatatt
gtgggagactgtttcaaagatgtgttatctgacgatgagagtctatgcacattgaaagga
ggcattaccgattcgcaaaccaagggagataattcatatatgaaaggagataaacctgat
tctcaaccagaaacagtcttacaagagacaaactcagatttgtttgacgatagtctgaca
gacatgttgataaatctggacaaggaaagtgaaaaggaaatgtccatggtcaattcaacc
ctgaaacaatcagagaacaacagcagatcaggaggcgacacctatagctttcctgtaatg
ttgctgtcagcagggagctccaaacgacctttaacctcaccccctgacctttccactcca
agcaagaagagacatattatgtctgaggaaaaccagccaacactttatgacatggtatca
ggtcaaccagtgcagagaggtcaaggaaagatcggatacagttcatttgtcacggaaaac
agatctcaagttatagctaaaaaccctacagctagatttgatgaagtgattgacttgtta
aaacagcagtgggagaatctatcacaggaagatcaacagaaatatgacaataactgcctt
gaaaaacctgaatatgattcaccaagggaaaatatctcgtcaaagaaagcaggaaagcat
cttggaaataaaatgaagctcaaaagtaaaccaataccagcaggtgtcagtataaaagat
cagctgatgttagcagcaaagaggagtaaatcaagacgagagactggcatttcattttcc
atgatcaaattacaaaacacttatttgagacagttaaacacaagccagtatccaaagaca
tcaacgttgaacctgattggccatttgaagtcatgtggtacatggacatgctgtcttggc
gagaaaatctgcattttcaattgccaccgtgtgcaggagacagttttgtatcatcaactg
atgtctgaccatgtgttgtcagttacacctctggaacagccaatcaaactcaatgctcaa
aacattggtgggaaggatcagtgggactgtctcatgtctcttgattccaaccgtttccct
ggtgatatatatagctttatcactgacgagaggatagtggacaatggcttcaaagtcaga
tgttacacagataatgagacaggcacctcacaagcggatgttgttgccatgacagccttc
attccagtgtatggtattcctgatctagctgaagtccttgagctaatctccaccactgaa
gcagagacagtgtctcggtgtcgacctcttaaagtcctcaattacctacagggagaggct
gtaaggatggctaggaagttacctcccttgctggacagagaggaggtgttggagttacaa
gaccagatgtccaccattctccctgatggatgtcatgtttgtctgcatgaccgaccattc
tgtcaccctatatatgacatggatgacctcccacagactcagtcaggtgcaacacaggaa
gttttgtcttga
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