Pecten maximus (king scallop): 117344123
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Entry
117344123 CDS
T07399
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117344123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117344123
04121 Ubiquitin system [BR:
pmax04121
]
117344123
03036 Chromosome and associated proteins [BR:
pmax03036
]
117344123
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117344123
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117344123
Ubiquitin system [BR:
pmax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117344123
Chromosome and associated proteins [BR:
pmax03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117344123
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
117344123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
RTT107_BRCT_5
zf-RING_5
Prok-RING_4
zf-C3HC4
DUF5803
Motif
Other DBs
NCBI-GeneID:
117344123
NCBI-ProteinID:
XP_033762661
LinkDB
All DBs
Position
15:9440641..9459300
Genome browser
AA seq
741 aa
AA seq
DB search
MAVQYEHTRSALSRLQTLLNCSKCNRIASSPCTLGSCEHIYCRECCEDVLGKSCPVCHIP
TDVRDAQVNRQLFTLVSLSKRLEEILASSPKDSGHSYVSDDQTTHLAPETTSDHKSSPTA
MGVKPNVTKQPCRRSTPAKPGKIPGSKCSVLSSPASKLGTRDTVPVNQSTMTQHFGYTDN
DEMTGEDEAIPETLVHRKVCDEVPVCNISGDSCMPQDSSRSSRSRTQSPRLSTVSRQKSP
VTVETPKDKTTATSTRNAKTQRRRSLPVKNTRNLRVRVLEKSDKDANQTEMKENKPNKKA
VNKRHSIGAVTAETISASLAVSGKKKSRRSLSPALVTGRYNISSSPATRSGGSTRSKVNS
TGMNTSLTGSGKKVVNEMEKRNAKGETPLQVGCIKGDLVKVKELLEGGATPNTRDNAGWT
PLHEACHYGYVDIARLLLDYGALIDVPGTENATPLHDAVSHGRVQCVALLVSRGASLATR
NLYGYTPVDCARSEEIKTALKTPVQSAPIVKETVDVLEYQLPCLLGTALNREQKIALQRC
AALLNAKVVQDFSPEVTHVITSNNQDGQCPRTIKYLMAVLQGKWVINMDWVNTCLEYGSR
VSEEAFEIPGTSANPNTLAPQRGRTNKKLQLPGLFDGCQFYFHGKFVYPTPDKTELMDLV
KAGGGLILRREPKVDSLDESTLTVPYHADPESDCAQCCVFVLHDNSVTFPKINTRRMCSL
PVRWLMDCMSTFTLINHCNKY
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacagtacgagcacacacgatcggctttgtctcgtttgcagacgcttctcaat
tgttctaaatgtaatagaattgctagcagcccttgtactcttggtagctgtgaacatatc
tactgcagggaatgctgtgaagatgttttaggtaagagttgtccagtttgccatattcca
accgatgtacgagatgcacaggtcaatcgccaactcttcaccctggttagtttgtccaag
agactggaagagatactcgccagttcaccaaaggacagtggtcactcctatgtctcagat
gatcagacgacacacttggcaccagagacaacaagtgaccacaaaagctcccccactgcc
atgggagtgaagccaaacgtaacaaagcaaccatgtcgaagatctaccccagcaaaacct
gggaaaatacctggaagcaaatgtagtgtcttgtctagtcctgcctcaaagttaggcacc
cgtgacacagttcctgtaaatcagagcaccatgacacagcattttggttacacagataac
gatgaaatgaccggggaggatgaggctatccctgaaactctggtacataggaaagtctgt
gatgaggtaccagtatgtaatattagtggtgacagttgtatgccccaagacagttcaagg
tcatccagatcaaggacacaatctcccagactatcgacagtatcaagacagaaaagtcca
gttactgttgaaacacctaaagataaaaccacagcaacatcgactagaaacgctaaaaca
cagcgtaggaggagtttaccagtgaagaatacaaggaatttaagagtaagagtgttagaa
aaatcggacaaggacgctaatcaaacagaaatgaaggaaaataaaccaaacaaaaaggca
gtgaataaacgacattctatcggtgccgtcacagcagagaccatttctgctagtttagcc
gtttcaggaaaaaagaaatcacgtaggagtttgtctcctgctctggtgacagggagatat
aatatctcatcctcccccgctacaaggtcaggaggtagcacaaggtcaaaggttaattcc
acaggaatgaacacgtccctgactggctcggggaagaaggttgtgaatgagatggagaag
agaaacgcaaagggtgaaactcctttacaggttggatgtatcaagggtgatcttgtgaag
gtcaaggagctgttggaaggaggagcaacacctaacaccagagataatgcaggctggacc
cctctgcatgaggcctgccattatggttatgttgacatcgctcgtctgttgttggactat
ggagcactcattgacgtccctgggacagagaatgccacgccccttcatgatgctgtctcc
cacggcagggtgcagtgtgtggcactgctggtatcccgaggggcctccctcgctacgagg
aatctgtatggttacacaccagtggactgtgctcgctctgaggagatcaagactgccctg
aaaacacctgtccagtcagctcctattgtcaaggagactgttgatgtattggagtaccag
ttgccatgtttactgggtacagccctaaacagagaacagaagatcgccctacagagatgt
gcagccctactcaatgccaaggtggtacaggactttagtcctgaagtgacccatgttatt
accagtaataaccaggatggccagtgtcctcgaaccataaagtacctgatggcagtgctc
cagggcaagtgggtcatcaatatggactgggttaacacttgcctggagtatgggagccgt
gtcagtgaggaggcatttgagataccaggaaccagtgcaaatcccaacacactggctcca
cagaggggcaggaccaacaaaaagcttcagcttcccggtttatttgatggttgccagttt
tacttccatggtaaatttgtgtaccccacaccagataagacagaactgatggatctggtg
aaggcgggaggaggtctgatccttagaagggaaccaaaagtcgacagtttagatgaatcg
actttgactgtgccttaccatgctgatcccgagagtgactgcgctcagtgctgtgtgttt
gtactacacgataattctgtgacatttcctaagatcaacaccagaagaatgtgctcatta
ccagtacggtggcttatggactgtatgtcgacttttacattgataaaccattgtaataaa
tattag
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