Pecten maximus (king scallop): 117344236
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Entry
117344236 CDS
T07399
Name
(RefSeq) integrin alpha-8-like isoform X1
KO
K06584
integrin alpha 8
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04512
ECM-receptor interaction
pmax04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117344236
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117344236
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmax04515
]
117344236
Cell adhesion molecules [BR:
pmax04515
]
Integrins
Integrin alpha subunits
117344236
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
LYRIC
EphA2_TM
Integrin_alpha
DUF1737
TMEM154
Motif
Other DBs
NCBI-GeneID:
117344236
NCBI-ProteinID:
XP_033762805
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Position
15:30997726..31119729
Genome browser
AA seq
1095 aa
AA seq
DB search
MCVLCGANMLVRLRCTCRVVSYVFLCVLLLFIDSARGFNLEVEFPDVRTGSPGSMFGYSV
AQHIDQGEGWLLVGSPTAATQQAGIIRGGAVYRCRANNTADNCSIIPFDERGNSNQFNGT
LYLAIEDKSHQWFGATVASSGNDGNILACAPRYVYKSPKADKRAPVGTCYLARYNTFQEF
TPCKSSVDLNPNSVDQHNNQGSCQAGFSISMSNNGERLLIGAPGAYYWQGQVHNIYLDRG
NSRKDTGEEPQASDDSYRGYSSAVGRFDADEEDDYVVGVPRAEFLLGKVELWTQNMTSIR
NISGEQIGAYFGYALAVEDLDGNKLHDIIVGAPFYSDYSSTKSYDTGRVYIYYQNKQGEF
STSDIVETEVRQFRPNRRTRYDILDGHSPKSRFGSALIGLGDLNIDGFKDLAVGAPYGGR
ENRGAVYIYLGSERGIVTKVSQVIEGVDLKPNIGTFGWSLSGGQDLDGNRYPDLLVGAYS
SNNAVYLKARPIVYVAASLKIDPKKISLDRKVCNYKGSTASHKVTCVTLFTCIKYDGIGV
PRQLVFDLSWKFDVDKNTLDAKRLYQLNTNQVVEYVNNKRLTKNKAWCQNSFVYIRNDIR
DKLSPINVQFEFKLKKRSLSRRRRSLQPILDQYTPTLVNTTGHIQKECGEDEQCIPDVWG
TAYTFTDNVKLGSTSNIDIVVHLENRGEGAFETMLYIELPRGVQYNGIQDRKFTIPFSCD
RYTTNETNLVTCDMGNPLPTKAKANFTLRVTPGDIDGNMDRLMFKFVINSSNAELNSTYS
DNTFMVGIPVIQSADIIIIGRLGENQTEQIIYNDTGVATFKHSIYGPAVVHEYDVRNLGP
SDIKESMIDIYWPSFDEVGRNLLYLTHTPEVIGQQNSLCETIVITPFNSSLIVWYSEFNK
EGQKMDVVMAKHQAEARRKRRSLDAQTGSRVSRDSSNKIVCNKNWCTIIRCKLGYMKPQD
SAVVRIRSRIWTDTLVKSGLTSEPYLITSQAVAEVRKMPYDTRVANQTYTIATYEIGSYV
NAKKLAPQPKSVESWVIVVAVSAGLLLLLLLIVLLWWCGFFRRKRREQEETYASKPLMTN
GANNTKYDINSKRYE
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttttgtgtggagccaatatgcttgtaaggctgagatgtacgtgtagggtagta
tcctatgtgtttttatgtgttttgctcctcttcattgactcggctcgaggatttaaccta
gaagtggagtttccagacgtccggacaggcagtccggggagcatgttcggttactctgta
gctcaacacatcgaccaaggagagggatggcttctggttggttctccaacggctgccact
caacaggccggtattatcagaggtggcgccgtctacaggtgtcgggcgaacaacacggcc
gataactgttccataattccgtttgatgaacgaggtaactcaaaccagtttaatggcaca
ttatatttagctatagaagacaagtcccatcagtggtttggggccacagtggcaagttct
ggaaacgatggaaatatcttggcatgtgcaccacggtatgtttacaaatctcccaaggca
gacaagagagcacctgttggcacgtgttacctggccagatacaatacattccaggagttc
actccctgtaaatcctcggttgatctgaatccaaatagcgtagaccaacataacaaccag
ggttcttgtcaagccggcttctctatatccatgtcaaacaatggagaaaggcttttgatc
ggcgcacctggggcctattattggcaaggacaagtacacaatatatatcttgacagaggg
aactctaggaaagacaccggagaagaaccgcaggcatcagacgacagttatagaggctat
tccagtgcagtgggcaggtttgatgcagacgaagaagatgattatgttgtgggtgtgccc
agagcagaatttcttcttgggaaggtggagctttggactcagaatatgacatctatccga
aacatctcaggagaacagattggggcgtacttcggctatgcacttgcagtagaagatctg
gatggtaacaaactccatgacatcattgttggtgcaccattttattctgactacagttcc
acgaaatcgtacgacactggcagagtgtacatttactaccaaaataaacagggcgagttc
tcaacttcagacatcgtagagacggaggttagacaattccggcccaataggagaacacga
tacgacattttggacggacactcaccaaagtctaggtttgggtcagctctgattggattg
ggtgacttaaacatagacggatttaaagatctagctgtaggggctccatatgggggccga
gaaaatagaggagcagtttacatataccttgggtcagagagaggcatagttacaaaggtg
tcacaggttatagaaggtgtcgacctcaaaccaaacataggtacatttggctggtcacta
tctggtggtcaagatctggatggcaaccgatatccagatttgctagttggagcttattct
tcaaacaatgctgtatacctaaaagctcgtccaattgtatatgttgctgcaagcttaaag
attgacccaaagaaaatttctctggatcgtaaagtttgtaattataagggatccactgct
tcccacaaagtcacatgtgtgaccttgtttacctgtattaagtatgatggtataggagtg
cctcggcagctagtttttgatctgtcctggaagtttgatgttgataagaatactttagat
gccaaacgtttgtaccaacttaatacaaaccaagtggtggaatacgtcaacaacaaacgg
ctcacgaaaaacaaggcctggtgtcagaactcttttgtatatatcaggaatgacataagg
gacaagctttcaccgatcaatgtccagtttgagtttaaacttaagaagaggagcctgtcc
cgtcgtcggcggtcactacagccaatccttgaccagtacacacccacgttagtaaacact
acgggccatatacagaaagaatgtggagaggacgagcagtgtattcctgatgtatggggc
acagcttacacgtttactgacaacgtcaaacttggcagcaccagtaatatagatatcgtt
gtccatcttgaaaaccgaggggagggagcttttgagactatgctgtacattgagctgcca
aggggagtccagtacaacggtattcaggacagaaagtttaccattccattttcctgtgat
agatatacaacaaatgaaacaaacctggttacatgtgatatggggaatccactcccaacc
aaggcaaaggcaaactttacattacgtgtaaccccaggagacattgatggaaatatggat
agacttatgtttaaatttgtcatcaacagttcaaacgcagagctcaactcgacatacagt
gacaacacattcatggtgggcattcccgtaatccagtcagccgacatcatcatcattggt
cgtctcggggaaaaccagacagaacagatcatctacaacgatacaggggtggccacattt
aaacacagtatctatgggcccgcagtcgtacacgaatatgacgtgaggaacttgggtccc
agtgatatcaaagagagtatgatcgatatttactggccgagcttcgacgaggttggtcgt
aacctgctatacctaacccatacacccgaggtgattgggcagcaaaacagcctctgtgaa
acaattgttataacgccatttaattcttcattaatagtttggtacagtgaattcaacaaa
gaggggcagaagatggatgtagtcatggcaaaacatcaggcagaggcccggaggaaacgt
cggtcattagatgctcagacagggtcaagagtcagtcgagacagcagcaacaaaatagta
tgtaacaagaactggtgtactatcataagatgtaagcttgggtacatgaaacctcaggac
tccgcggtggtgaggatacgatcacgaatctggaccgatacccttgtaaagagtggactt
accagtgagccgtatttaataacatcccaggctgtagccgaggtcagaaaaatgccatac
gacacacgagtagccaaccagacatatactatagccacgtatgaaattggctcatatgta
aatgccaaaaaattagctccacaacctaaatctgttgaatcctgggtcatcgttgtagct
gtgtcagccggtctcctactacttttgttattaatagttctactgtggtggtgtggattt
ttccgaaggaagagacgagaacaagaagagacttatgcatcaaaacctttaatgacgaac
ggagctaacaatacgaaatatgatatcaattccaagcgatatgaataa
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