Pecten maximus (king scallop): 117344287
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Entry
117344287 CDS
T07399
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117344287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmax03041
]
117344287
Enzymes [BR:
pmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117344287
Spliceosome [BR:
pmax03041
]
Complex C
Other components
Step II factors
117344287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
ABC_tran
PhoH
TsaE
Motif
Other DBs
NCBI-GeneID:
117344287
NCBI-ProteinID:
XP_033762870
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All DBs
Position
15:complement(9797431..9827516)
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AA seq
1252 aa
AA seq
DB search
MNELEKLEHLSLVSKVCTELDNHLGLNDKDLAEFIISLSEKNDTFDAFKKVLSENGAEFS
DSLIANLLRLIQKMKPKSREKEKTDDSYKENQRDDDVSLKRKLYPGLALANDPNTRKMLE
EIKEEETADTDNIKKEDTEVADDMMGELMALMSKPPDSQSDDKAKKHQTKHSRSRSRERD
RKHSRSRSRERDRKRSRSRERDRKRHKNHRRSRSRSPRDRKRSRSRERRRDRSRSNDRDR
KHRKRSRSRSRERQSKYYRDEEDRKDRYRGGRNKREQESDDEEIPMEPVVGRIFKGRVTT
LMQFGCFVQLEGLRKKCEGLVHISQLRREGRVTKVSDVVQRGQKVKVKVLSFAGNKTSLS
MKDVDQETGEDLNQERTRSLVGGEMKDESEAARNPDRPSTLPMMDLPDTDETQDKKRVQR
ISSPEKWEIKQMIAANVIDKSELPDFDEETGLLPKEEDSDEDVEIELLEEEAPFLAGHGR
AGIDLSPVKIVKNPDGSLSQSAMMQNALQKERRELKQVQREAEMGSVPAGLNNHWIDPMP
EADGRQLAANMRGIGMTPNDIPDWKKHITGGQKASYGKKENKSLLEQRQGLPIYKLKDEL
IKAVNDNQVLIVIGETGSGKTTQITQYLAETGYTTRGKIGCTQPRRVAAMSVAKRVSEEF
GCRLGQEVGYTMRFEDCTSPETKIKYMTDGFMLRECLIDPDLLQYSIIMLDEAHERTIHT
DVLFGLLKEAVKKRKDLKLIVTSATLDAVKFSQYFFEAPIFTIPGRTYPVEVLYTKEAET
DYLDASMITVMQIHLMEPPGDVLLFLTGQEEIDTACEILYERMKALGPEVPDLIILPVYS
ALPGEMQTRIFEPAPPGSRKVVIATNIAETSLTINGIYYVVDPGFVKQKVYNSKTGMDQL
IVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLATNVPEIQRTNLASTVLSLKA
MGINDLLAFDFMDAPPMQTLISAMEQLHALTALDDEGLLTRLGRRMAEFPLEPMLSKMLI
MSVHLACSDEILTVVSMLSIQNVFYRPKDKQAMADQKKAKFHQSEGDHLTLLSVYNSWKN
NRFSSPWCYDNFVQIRTLKRAQDVRKQMLGIMDRHKLDVVSCGKNTARVQKAICSGFFRN
AAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPDWVIYHELVLTTKEYMREVTTIDPKWLV
EFAPKFFRFSDPTRLSKHKKQQKIEPLYNKYEEANSWRISRAFKKVHTKVTF
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacttgagaaactcgagcatctttctttggtatcgaaagtctgcacagagtta
gacaatcacttgggattgaatgacaaagatctagctgaattcatcatatccttatcagag
aaaaatgatacgtttgatgctttcaagaaagttctttctgaaaatggagcagaattttca
gactctctgattgctaacctgctgagattgatacagaagatgaagccaaaatctcgagaa
aaagagaaaaccgatgacagctacaaggaaaaccagagagatgatgacgttagtctgaag
aggaagctatacccaggattagctttggctaacgacccaaacaccaggaaaatgttggaa
gaaataaaagaagaagaaactgcggatactgataatataaaaaaagaggacacagaggtt
gctgatgatatgatgggtgaacttatggcactgatgtcaaagccccccgacagtcaaagt
gatgacaaagctaagaaacatcaaaccaagcatagtcgcagtaggagtcgagaacgagac
agaaaacatagccgcagtaggagccgagaacgagacagaaaacgtagccgcagtagagag
cgtgacaggaaaagacataaaaaccatcgtcggtcaagaagtcggtcaccaagagacaga
aaaagaagtcgtagtcgtgaaagacgacgggacagatcaagatcaaacgatcgggacaga
aaacacagaaagcggtcaaggagcaggagcagggagagacagagtaaatattatcgtgat
gaagaagatagaaaagacagatacagaggagggagaaataaacgagagcaggaatcagac
gatgaggaaattccgatggagcctgttgttggcaggatatttaagggaagagtgaccaca
ttgatgcagtttggttgttttgtacaactggaaggtttaaggaagaaatgtgaaggactt
gttcacatatcacagctgaggagagagggacgtgtgacaaaggtcagtgacgtggttcaa
cgaggtcagaaggtcaaggtcaaagtgctgtcatttgctggaaataaaacaagtctttca
atgaaggatgtcgaccaggaaacaggagaggatttgaaccaggagaggacgcgatctctg
gttggtggagaaatgaaggatgaaagcgaggctgcgcgtaacccggatcgtccatccact
ctaccgatgatggaccttccagatacggacgaaacacaggataagaagcgtgtccagcgc
atttcttcacctgaaaagtgggaaatcaagcaaatgatagctgcgaatgtcatagacaag
tcagagttacccgactttgatgaggagactggactacttcctaaagaagaggattcagat
gaggatgttgagattgaactgttagaggaggaagctcccttcctggcaggtcacgggcgt
gctgggattgaccttagtcctgtcaaaatcgtcaagaatcctgatgggtcgctgtcccag
tcggccatgatgcagaacgccctgcagaaagagcggcgagagttgaaacaggttcagaga
gaggcggagatgggcagtgtccctgctggtctcaacaatcactggattgaccccatgcct
gaagctgatggacgacaactagctgcaaacatgagaggaattgggatgactcccaacgat
attcctgattggaagaaacatatcacagggggacaaaaggcttcatacggtaaaaaggag
aataaatcattgctggaacagaggcagggtctacccatctataaacttaaggatgaactc
atcaaggctgtcaatgacaatcaggtgttgattgttattggagagacagggtcaggaaag
acaactcagatcacacagtatttggctgaaactggatacacgacacgcggtaagatagga
tgtactcagcctcgtcgtgtggccgccatgtctgtcgccaagagagtgtcggaggagttt
ggttgtcgtctgggtcaagaggttggttacacaatgcgttttgaggactgcacgagtccg
gagaccaagataaaatacatgactgatggttttatgctgagagaatgtctaatagaccca
gatctcctgcagtattccatcattatgttggatgaggctcacgaacgtaccatacacaca
gacgtcttattcgggctgcttaaagaggcagtcaagaagcgtaaggatctgaaactgatt
gtaacttctgccacactagatgctgtcaagttctcacagtatttctttgaagcaccaatc
tttactattccggggcggacataccctgttgaagtgttatacaccaaagaggcagagact
gactacctggacgcctccatgatcaccgtaatgcaaatacacctgatggagccgccagga
gatgtattactgttcctcactggccaggaggagatcgacacagcctgcgaaatcctgtac
gaacgtatgaaggccctgggccctgaggtcccagacctcatcatcctccccgtgtatagt
gcacttcctggtgagatgcagacccggatctttgagcctgctcctcctgggtctaggaaa
gtcgttatcgcgaccaacatcgcggaaacttctcttaccattaatggaatttattatgtg
gtggatcctggctttgtgaaacagaaagtgtataactctaaaactggaatggatcagctg
attgttactccaatttcacaggctcaggctaaacagagagctggtcgggcaggaagaact
ggtcccggaaaatgttacagactctacacagaacgtgcgtatcgtgacgagatgctggca
acaaacgtacccgagattcagaggacaaacctggccagtactgtgttgtccctgaaggcg
atggggatcaatgatctactggctttcgatttcatggatgccccaccaatgcaaacgttg
atctctgcaatggaacagctacatgctctcactgccctggacgatgaaggtctgctgacc
agactcggacgtaggatggcagagtttcccttggagccgatgttgtccaagatgttgatt
atgtctgtccatctggcatgtagtgatgaaattctcacagtcgtgtccatgttgtccata
cagaatgtcttctacagacccaaggacaagcaggcaatggcggaccagaaaaaggccaag
tttcaccagtcagagggcgaccatcttactctgctgtctgtctacaactcatggaaaaac
aaccgcttctccagtccctggtgctacgacaactttgtccaaatacgtacgcttaaacgg
gcccaggatgtacgcaaacagatgcttggcatcatggacagacacaagttagatgttgtg
agctgtgggaagaataccgcccgggtacagaaggcaatctgtagtggtttcttccgaaat
gctgctaagaaagacccccaggagggctacaggacattggtagatagccaagtagtctac
atacacccatctagtgccctgttcaaccgacagccggactgggtgatttaccacgaactg
gtgctgaccacaaaggaatacatgcgtgaagttacaactattgacccaaaatggctcgtg
gaattcgctcccaaattcttccgattctctgacccaaccagactgagcaagcacaagaag
caacagaagattgaacccctgtacaacaaatatgaagaggcaaactcatggaggatttcc
cgcgccttcaagaaggttcatacaaaggtcacattctga
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