KEGG   Pecten maximus (king scallop): 117344433
Entry
117344433         CDS       T07399                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
pmax  Pecten maximus (king scallop)
Pathway
pmax03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmax00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117344433
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmax03019]
    117344433
Messenger RNA biogenesis [BR:pmax03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     117344433
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_WDHD1_1st WD40_CDC20-Fz CSTF1_dimer WDR55 Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_SCAP WDR90_beta-prop_4th eIF2A Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_NWD2_C Cytochrom_D1
Other DBs
NCBI-GeneID: 117344433
NCBI-ProteinID: XP_033763051
LinkDB
Position
16:complement(24686123..24696471)
AA seq 431 aa
MGSEHDEVKQRDLMYRLMISQLFYDGHQKLAVSLSTLVKAHPACPPSDRLFKVLKYGLEI
EEEIHGKELIGSENVAPGSGIDLEYETDVQTISPEAALYETCYVTAHKGPCRAGAFHSGG
KLIATGSEDSSIKILDVERMLAKSATPAEIIAMETPQQAMENHPVIRTLYDHNDEVTCLD
FHPNHQILASGSKDFSIKFFEYSKPSXKKAYKSIQEASEVRCLSFHPSGEYILCGTKHPT
LRLYDVNTFQCFVGRHPSHQHEGPLTAVKWCPNANLFVTSSKDGDIKIWDGVSNLCINTF
KKAHDGNEVCSVTFSRNSKYVVSSGKDSLVKLWELSTNRCLIVYTGAGATGKQQHRTQAV
FNHTEDYVLFPDEATTSLCCWDSRNAERQRLLSLGHNGAVRYIAHSPTGPAFITCSEDFR
ARFWYRKADTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggggtcggaacacgatgaagttaaacagagggatttgatgtatagactgatgataagt
cagctattctatgatggacatcagaagctggctgtttcattgtcgactctagtgaaggcc
cacccagcctgtcctccctctgaccgactcttcaaggtgctcaagtatggcctggagatc
gaagaagagatccatgggaaagagctgataggatctgaaaatgtagcccctggatctggg
attgacctggaatatgaaacagatgttcaaaccatatccccagaggcagctttgtacgag
acctgttacgtgacagctcacaaggggccatgtcgtgctggtgcctttcacagtggagga
aaactgatagctactggatcggaagattcttctatcaagattttagatgtagagaggatg
ttggccaagagtgcaacaccagccgaaatcattgccatggaaacgcctcagcaggccatg
gagaaccacccagtcatccgaactctgtatgatcataacgatgaggtgacatgccttgat
tttcatcccaaccatcagattctggcttctggcagcaaagatttcagtatcaagttcttt
gagtattctaaaccatctngtaagaaagcatacaagagtatacaggaagcatcagaggta
cgctgtctgtcatttcacccgtcgggagagtatatcctctgtggtaccaaacatcccacc
ttgcgtctgtatgatgtaaacacattccagtgttttgttggccgacatcctagccatcaa
catgaaggaccacttacagcggttaaatggtgtccgaatgctaacctgtttgtgacaagt
tcaaaggacggggacattaagatctgggacggagtaagcaatctctgtatcaacacattt
aaaaaagcacatgatggcaacgaggtgtgctccgtcaccttctcaagaaactcaaagtat
gtagtatctagtggtaaggactcactcgtgaagttgtgggagctgtctacgaacaggtgt
ctcatcgtgtacactggagcaggggctaccggcaaacagcaacaccgcacacaggcagtg
tttaaccatactgaagactacgtgctgttccctgacgaggctacaacaagtctgtgctgc
tgggattcaaggaatgctgaaaggcagcgtctcttgtcattaggtcacaatggtgcagtc
cgatacatagcacactcgccaactggccctgcatttatcacgtgtagtgaggacttcaga
gcacgattctggtacaggaaggccgacactgactaa

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