Pecten maximus (king scallop): 117344464
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Entry
117344464 CDS
T07399
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117344464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117344464
03012 Translation factors [BR:
pmax03012
]
117344464
Enzymes [BR:
pmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117344464
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117344464
Translation factors [BR:
pmax03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117344464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
AAA_16
NPHP3_N
NACHT
T2SSE
ATPase
Motif
Other DBs
NCBI-GeneID:
117344464
NCBI-ProteinID:
XP_033763100
LinkDB
All DBs
Position
16:complement(3024819..3075626)
Genome browser
AA seq
1151 aa
AA seq
DB search
MLVLHMFHRRLGLLSLRATSTMSYGGEGRRQPWKRGGGGWGRGRRYGNNSREDQDGDGWG
RGGGGRQRGGYRGGRRGRRWEGEEGEEGGGHGERERRGGGGGGRGRHPSGLSGREIGMFY
REKSLANAAKREKEMTPVVNLQGNMKRKIRNLLDDINTADNIQPQPFRSGASLDKDMSAT
TERPSTSRTEGYSQETFARPNTTAGSSSGQRSTGARGQGSQEYQSFKIKSNREESRTDSS
YDPWMDTDSDRTETGSIGRNSSREATGGEDNLLEQDEDYDEYAELPMDEEVMQNQKEAMS
FLFDDEMDYDSLGLSGLESDPDLDQFLMKQADSRKTNRHFMKMMDFRKNLPSFKKRKEIL
EALESHQCLVISGETGCGKTTQVPQFILDDYISHGKGSQCKVICTQPRRISAISVAERVA
DERGQNLDGGDIGYSIRLERKLPRSQGSLLFCTTGILLKYLESDPSLNRVSHIIVDEIHE
RDLLSDFLLIILKDLLPKRPNLKVILMSATLNAEQFSSYFNECPMLHIPGFTYPVKEYWL
EDSIQMTGYCLEESVRKKKRFYNRKQAEQCQLELDEKAAWVKTLDSTKYSPSTKRTLVNM
DMTEVDIDLIHQIIHHICFKMDGDGAILVFVPGMAEIKNLNKSLVNTPAFNNRNFRIIPL
HSLMPTVNQREVFDRPPPGVRKIIIATNIAETSITIDDVVYVVDAGKIKIKDFEPESNLS
TLSSQWVSKANARQRRGRAGRVQEGVCFHLFTSLQQESLIDYQLPEILRTPLEELCLQIK
LLKLGMVEPFINKAMQQPSPKAVHSALTTLQDLKALDEDENLLPLGHHLARLPVDPKSGK
MILFGAMFGCLDPICTIAASLSFKNAFVVPLGKEAEVDQVKSRLSEESQSDHIMLVNAFK
GWERAKQRGTAPHYCFENFLSSSVLKQLAEMKGQFAKLLHDRKFVKTWSPSDPSVNINSD
NENLVKAIICAGLYPNVAKLASARKPKHYKPVKLHLKGKEFVYLHPSSVNKRSQGTNSSW
FIYHKKMKTEQVYLYDTSVVSPYSLLMFGGEIATSEEIVDDEVRPKVTVDDWILFWTSFS
TAQMVKDLRLQLDRILEEKIKHPGPTNWSKSSREGAIMSAITELLTTEELVNYRDEKNQQ
QRHEQYQGYRS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttctacacatgttccaccgacgactcggtctattgtcattacgagcaactagt
acaatgagttacggaggtgaaggtcgacggcagccatggaagagaggaggaggtggctgg
ggacgtggtcgcagatatggaaataacagtagggaagatcaggatggtgatggctggggc
agaggtggaggcggaaggcaaagaggagggtatagaggaggacgaagaggaagaagatgg
gaaggagaggagggagaagaagggggaggacatggagagagagagcgaagaggaggagga
ggaggaggtagaggacgacacccatcaggcttatctggcagagaaatcgggatgttttat
agagaaaaatctctagctaatgctgctaagagagaaaaagaaatgacccctgtggtgaac
ctacaaggtaatatgaagcgtaagatacgtaatctgctagacgatatcaacacggcagat
aacatccagcctcagcccttcagatctggtgcctctctggacaaggatatgagtgcaaca
actgaacggccatccacatctcgtaccgaaggctacagtcaggagacttttgcgcgtcca
aacactacagcaggttcttctagtggacagaggtcaacaggtgccagaggtcagggttca
caagaatatcaaagtttcaagattaaatcaaatcgggaagagagcagaactgattcttct
tatgatccatggatggatacagattctgacagaacggagactggttcaattggacgtaac
tcttcaagggaggcaactggaggagaagataatttacttgagcaagatgaggattatgat
gaatacgctgagttgccaatggatgaggaggtcatgcaaaaccaaaaggaggcaatgagc
ttcttatttgatgatgaaatggattatgattccttgggattatctgggttagagagtgac
ccagacttggaccaattcctaatgaaacaagcagatagccgtaagactaacagacacttt
atgaagatgatggactttaggaaaaatctgccttcctttaaaaagagaaaggaaatactg
gaagccttagaatcacaccaatgcttggtaataagtggtgagactggatgtggcaagact
acacaggtgccgcagttcattctagacgactacatatcacatgggaagggctcacagtgt
aaagtgatatgtactcagccaagacggatcagcgccatttctgtggcggagcgggtagca
gacgagcgtggacaaaatttagatggtggggacattggatactctatcagactagaaaga
aaactaccaaggagccagggatcgttattgttctgtacaacagggatactgttgaaatac
ttagagtcagatccatccttaaatcgagtcagccatattatcgtagacgagatacatgag
agagatcttttgtccgattttcttctcatcatcctcaaggacctcctccctaaacgtcct
aatctcaaggtcatactgatgagtgcgaccttgaatgccgaacaattctcaagttacttc
aatgaatgtcccatgctgcacatccccggatttacgtatcctgtgaaggaatactggctg
gaagattccatacaaatgaccggctactgcctcgaagaatcagtacgaaagaaaaaaaga
ttttacaacagaaaacaggccgagcagtgtcagcttgagttagatgagaaggcagcctgg
gttaaaacactggactccacaaagtactccccatcaacaaagaggacactggttaacatg
gacatgacagaggtggacatcgacctcattcaccaaatcattcatcatatctgcttcaaa
atggacggcgatggggccattttggtatttgttcctggtatggcagaaataaaaaatctg
aacaagagtttagttaatacaccagctttcaacaatcgtaattttcggataattcctctt
cattcactgatgcctactgtgaaccagagagaggtgtttgatcgaccaccacctggtgtg
aggaagatcatcatagctaccaacatagccgagaccagtatcactattgacgatgtggtg
tatgtggtagacgctgggaagataaagataaaggatttcgagcctgagtctaacctatca
acactgtcctcccagtgggtgtccaaggccaacgctcgacagaggcggggtcgagctgga
cgtgtccaggagggtgtgtgtttccacttgtttaccagtctccaacaggaatcactaatc
gactaccaactaccggagattctacgcactcctctggaggaactatgtctacaaataaag
cttttaaaacttggaatggtggagccatttatcaacaaagccatgcagcaaccgtccccg
aaggctgtccactccgctctgacaacactacaagacctgaaagctctggatgaggatgag
aatcttctccctcttggccatcaccttgcacggttgcctgttgaccccaagtctggcaag
atgattctgtttggagccatgtttggctgtctggatccgatctgcactattgctgcaagt
ttgagcttcaagaatgcctttgttgttcccttgggaaaggaagctgaagtcgaccaggtg
aagtccagattgtctgaagaaagtcaaagtgatcacatcatgctcgttaatgctttcaag
ggctgggaaagagccaagcagagaggaacagctccacattattgctttgagaacttcttg
tcttcaagtgtgctaaagcaactagctgaaatgaaaggacagttcgctaaattgttacat
gatcgcaagtttgttaaaacatggagtccatctgatccatcagtgaacatcaattccgat
aatgaaaacttggtaaaagcgataatctgtgctggattgtacccaaatgtggccaagcta
gcatcggcacgcaaaccaaaacattacaagcctgtgaagcttcaccttaaaggcaaggag
tttgtttacctacacccatcatctgtaaacaaaaggagccaagggacaaactcctcttgg
ttcatctatcataagaagatgaaaactgagcaagtttatctgtacgataccagtgtagtg
tctccctactctctccttatgttcggtggggagatagcaacatcagaagaaatcgtggat
gatgaagtcaggccaaaggttactgttgacgactggatattgttttggaccagcttttca
acagctcagatggttaaggaccttcgacttcaactagacagaatattggaagaaaagatc
aaacatccaggaccaacaaactggtccaaaagtagcagagagggggccatcatgtctgcc
attacagaactccttaccacagaagaacttgtcaattatagggacgagaaaaaccaacaa
cagcgacatgaacagtaccagggatatagaagctga
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integrated database retrieval system
