Pecten maximus (king scallop): 117345176
Help
Entry
117345176 CDS
T07399
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmax03009
]
117345176
Enzymes [BR:
pmax01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
117345176
Ribosome biogenesis [BR:
pmax03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117345176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
117345176
NCBI-ProteinID:
XP_033764071
LinkDB
All DBs
Position
16:complement(12961867..12979943)
Genome browser
AA seq
685 aa
AA seq
DB search
MGRKRDLTNVVKSGPGKKTKKQKPPQVPNSVKNEDADDSEKKLSSRQKQRVKKRLQKQQE
KIEIKEKKKEEKLQQKIKKESQKPGKFARAPVVKKKRKMEESESESEEESDDNEEDDEED
SDEEETKPVKGYSDDNKTWLKPSSKRALMDSDESEEADEDEDESDGVAGDDFDDVGLSDD
DESEDDSEESGDEDLLPVEKKAKKLEKKREKNKKLAEAELQTNITDMETFTLPSGQEVEK
EAAQAPDITMVQQRIKEVIHVLAEFKDRREPGRSRQEYVRQLRSDFCTYYSYNDYLMDKI
MTLFPLEIQEFLEANEVPRPVTIRTNTLKTRRRDLAQALINRGVNLDPIGKWSKVGLIVF
DAQVPLGATPEYLAGHYILQGGSSFLPVMALAPQENERILDMASAPGGKTTYIAALMKNT
GTLFANDANADRAKAIVGNIHRMGITNTIVCHHDGRVFPKIMKGFDRVLLDAPCSGTGVI
SKDVEVKMNKDEKDILRCAHLQKELLLSAIDCCDANSKTGGYLVYSTCSVLTEENEAVID
YALKKRNVKLVPTGLDFGREGFVNLQQHRFHPNMKLTRRFYPHTHNMDGFFVAKLKKFSN
KIPGTGAATADGEAEGESSKVIDDSSKNTKQSENVKNNSDSDSDDEEEKRKTSKKDKSKN
KWLAKKSNKKQFKPGKFKKFKSVGK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaaaagggacctgaccaatgtggttaagtcagggcctgggaaaaaaacaaag
aagcagaaaccaccacaggttccaaattctgtaaagaatgaagatgctgacgattcagaa
aagaagttgtcaagcaggcagaaacagcgtgtaaagaagagattacagaaacagcaggaa
aagatagaaataaaggaaaagaaaaaagaagaaaaattgcaacagaaaataaaaaaggaa
agccagaagcctggaaagtttgcaagggctccagttgtcaagaagaaaaggaagatggaa
gaaagcgaaagtgaaagtgaagaagaaagtgacgataacgaggaagatgatgaagaagat
agtgacgaggaggagacaaagcctgtcaaaggatactcggatgataataaaacctggttg
aagccgtcatctaagcgagcattaatggattcagatgagtcagaagaagcagatgaagat
gaagatgaaagtgatggagtagctggagatgactttgatgatgtaggattatcagatgat
gatgagagcgaagatgatagtgaggaaagtggggatgaagatttattacctgtagaaaag
aaagcaaaaaagctggaaaagaaaagagaaaaaaataaaaaacttgcagaagctgaactc
cagaccaacatcacagacatggaaacgttcacattaccaagcggtcaagaggtggaaaaa
gaagctgcccaggcaccagatattaccatggtgcaacagaggatcaaggaagtgattcat
gtccttgcagaattcaaagatcgccgtgagcctggaaggtcccgccaggaatatgtacga
cagctgaggtctgacttctgtacctactatagttataacgattatcttatggacaagatt
atgacactgtttcctctagagattcaagagtttctggaggccaatgaagtgccaaggcct
gtgactatcaggacaaacactctaaagactcgcaggcgagatcttgcacaggctttaatc
aataggggagttaaccttgatcccattgggaaatggtccaaagttggattgattgtattt
gacgcacaagtgcctctaggagcaaccccagaataccttgccggacattacatcctccag
ggaggatccagtttcctgcctgtcatggccctagctcctcaggagaatgagaggatactg
gatatggcctcggccccaggtggaaagacaacctacattgctgccttgatgaagaatacc
ggaacattatttgccaatgatgctaatgcagaccgggcgaaggccatcgtaggcaatatc
cacagaatgggcatcaccaacaccattgtgtgtcatcatgatggacgtgtgttcccgaag
attatgaaggggtttgaccgagttctactggacgcaccttgtagtggaacaggtgttatc
tccaaggatgtagaagtcaagatgaacaaggatgagaaggatatcctacgctgtgctcat
ctacagaaagaactgctgttatcggccattgactgttgtgatgctaattcaaagaccgga
ggatacctggtctactccacctgttctgtactgacagaagagaatgaggcggttatcgac
tacgcattgaaaaaacggaatgtgaagcttgtcccaacaggcctggactttggccgagaa
ggatttgtaaatttgcagcagcatcgcttccatcccaatatgaagctaacaagaagattc
tacccccacacacacaacatggatggattctttgtggcaaaactcaagaaattttcaaat
aaaatcccaggtacaggtgctgctacagctgatggtgaagctgaaggtgaaagttcaaaa
gtcattgatgatagttcaaagaatacgaaacaaagtgaaaatgtgaaaaacaattcagat
agtgacagtgatgatgaggaagagaaaaggaaaacgagtaaaaaggacaagtccaaaaat
aaatggttagcaaaaaagtcaaacaaaaagcagtttaaaccaggaaaattcaagaaattc
aaatcagttggaaagtaa
DBGET
integrated database retrieval system
