Pecten maximus (king scallop): 117345387
Help
Entry
117345387 CDS
T07399
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03022
Basal transcription factors
pmax03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117345387
09124 Replication and repair
03420 Nucleotide excision repair
117345387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmax03021
]
117345387
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117345387
Transcription machinery [BR:
pmax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117345387
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117345387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
117345387
NCBI-ProteinID:
XP_033764352
LinkDB
All DBs
Position
16:10981376..11003209
Genome browser
AA seq
404 aa
AA seq
DB search
MAEEDEKGYRWETEYEKTWEVIEEDDDGTIQSSVDDIIHKAKRRRLLEKLGNVRLGMMRH
MFLVIDISEAMKDQDLKPTRLASTLKLLEHFVEEYFDQNPISQLGIITTRNKRAEKVAEL
GGNPRRHITTLQSLVNKTFQGEPSLQNSLDLANQTLRHMPSHASREVLIVLGSLTSCDPG
DISETIQTMKENNVRCSIIGLAAEVRVCKRICQETNGKYFVILDEGHFRDLLISHVTPPP
ATSNTESSLIKMGFPHHNLSGDKRKGEKASMCMCHLDSKVNQGFSSSGYFCPQCKSKYCE
LPIECKSCGLTLVSAPHLARSYHHLFPLDTFVETPVSSIPTESTISCYSCQIAVQEPNVY
QCGKCQQLYCLDCDLYIHETLHSCPGCACSRETQQSSQQFAGLS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaagacgagaagggatacagatgggaaaccgaatatgaaaagacttgggaa
gttatcgaagaagatgatgatggtactatccagtcaagtgttgatgacatcatacacaag
gccaaaaggagacgtctcctggaaaaacttggcaatgttagacttggcatgatgcggcat
atgttcctggtgatagatatttcagaggcaatgaaagatcaggatctcaaacctactcgc
ctggcatcaacactcaagcttctggaacattttgtggaggaatacttcgatcagaaccct
atcagccagcttggtatcataacaactcgtaacaagagggcagaaaaggtcgcagagcta
ggaggaaacccgcgccgtcacatcactacactgcagtctcttgtcaataaaaccttccag
ggagaaccatcacttcagaattctcttgatttagccaatcagacactcagacatatgcct
agtcatgcaagccgtgaagtgttaattgtccttggcagtctcacgtcttgtgacccagga
gatatatcggagacgatacagacaatgaaagaaaacaatgtgaggtgctctatcataggt
cttgctgctgaagtccgcgtgtgtaagaggatttgccaagaaacaaatggtaaatatttt
gtgatactggacgaaggtcacttccgagatctcctcatctcccatgtaacaccaccccca
gcaacaagcaacacagagtcttcactgatcaagatggggtttcctcaccataatttgagt
ggagataagagaaagggagagaaggcttccatgtgtatgtgtcatctggacagcaaggta
aatcagggatttagtagcagtgggtatttctgtccccagtgtaagagtaaatactgtgag
ctgcccatcgaatgtaaatcatgtggtttgacgttggtatcggcaccacacctggctcgg
tcatatcaccacctatttccactcgacacatttgtggagactccagtatccagtatacct
acagagtcaaccatatcctgttattcgtgccaaatagctgtgcaagaaccaaatgtgtac
cagtgtgggaagtgccagcaactatactgtcttgactgtgacttgtatatccatgaaact
cttcattcctgtcccggctgtgcctgttctagggaaacacaacaatcctcacagcagttt
gctgggttatcctga
DBGET
integrated database retrieval system
