Pseudoalteromonas maricaloris DSM 15914: R5H13_01365
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Entry
R5H13_01365 CDS
T09524
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz03030
DNA replication
pmaz03410
Base excision repair
pmaz03420
Nucleotide excision repair
pmaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R5H13_01365 (polA)
03410 Base excision repair
R5H13_01365 (polA)
03420 Nucleotide excision repair
R5H13_01365 (polA)
03440 Homologous recombination
R5H13_01365 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaz03032
]
R5H13_01365 (polA)
03400 DNA repair and recombination proteins [BR:
pmaz03400
]
R5H13_01365 (polA)
Enzymes [BR:
pmaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R5H13_01365 (polA)
DNA replication proteins [BR:
pmaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
R5H13_01365 (polA)
DNA repair and recombination proteins [BR:
pmaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
R5H13_01365 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R5H13_01365 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WOX28952
LinkDB
All DBs
Position
1:330443..333199
Genome browser
AA seq
918 aa
AA seq
DB search
MSQIPQNPLILVDGSSYLFRAYHAPPHLTNSKGEATGAIYGVINMLKSLLKQYQPSHMVV
VFDAKGPTFRNEMYSEYKAHRPPMPDDLRTQIEPIHEIIKAMGLPLVSISGVEADDVIGT
FSKIASEQSRHVLISTGDKDMAQLVNEHVTLINTMTNTILDPEGVVDKFGIGPDLIIDYL
ALMGDKVDNIPGVPGVGEKTALAMLQGLGSIDSLYENLDKIADLGFRGSKTMAKKLEEHQ
AQLKLSYELATIKLDCEVEQDLEQFKIAEMDKDRLIELYGQCEFKRWLAELLDGQSQADI
VDVEAEGSAPAAAQVDTQYETILTKAQLDEWVTKLKAAQLIAFDTETTSVNYMQADLVGM
SFAVAPGEAAYLPINHDYVGAPEQLSQDIVFEIMAPLLADPQIKKVGQNLKYDQSVLARA
GLELQGIAFDTMLESYVFNSVGTRHDMDSLALKYLGHKTISFEDIAGKGKNQLTFNQIEL
EKAAPYAAEDADITLRLHQHLWPLIEKENRLKQVFTEIELPLLSVLSRIERTGVHIDGDM
LAKQSIEIEKRLGELEQQAFEIAGEEFNLSSTKQLQAILFDKLELPVIKKTPKGAPSTAE
EVLQELAHDYPLPKLIIEHRGLAKLKSTYTDKLPKLVNADTGRVHTSYHQAVTATGRLSS
SDPNLQNIPIRNEAGRRIRQAFVADNNKQIVAADYSQIELRIMAHLSQDKGLLSAFAEGK
DVHSATASEVFSVPLEEVTSDMRRKAKAVNFGLIYGMSAFGLSRQLDIPRNEAQHYMDMY
FERFPGVLEYMERTREEAADKGYVETLFGRRLYLPDINARNGARRKAAERAAINAPMQGT
AADIIKKAMIKVDEWLQSCDSNDIQLLMQVHDELVFEVHSDKVAEYSEKICELMSAAAAL
DVPLLVEADSGDNWEQAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatccctcaaaatccgttgatcttggttgatggttcttcctatttatttcgt
gcttatcatgcgccaccacatttaacaaattcaaaaggtgaagcaactggtgcgatctac
ggtgtgatcaatatgcttaagagtttgcttaagcaatatcaaccaagtcatatggtagta
gtctttgacgctaaagggccaactttccgcaacgaaatgtatagcgagtataaagcgcat
cgcccgcctatgccggatgatctgagaacgcaaattgagccgatccacgaaataattaaa
gcaatgggcctgccactggtaagtattagtggtgtcgaggccgatgacgtgatcggtaca
ttctctaaaatagcgtcagagcaaagtcgccatgtgctaatcagcactggtgataaggat
atggcgcaattggtcaatgaacatgtcacgttgatcaacacaatgacaaatacgatctta
gaccctgaaggggtagtggataagtttggtattggtcctgacttgatcatcgactatctc
gcgttaatgggagataaagtcgataatattccgggcgtaccaggcgttggtgaaaaaact
gcattggcgatgcttcaggggttaggctctatcgattcgctctacgaaaacttagacaaa
attgctgatttaggttttcgtggctcaaaaaccatggcgaaaaaactagaggaacaccaa
gcgcagctaaaattgtcgtatgaattagccactattaagctggattgtgaagtagagcaa
gacttagagcaatttaagatagctgagatggataaagatcgcttaatcgagctatatggt
cagtgtgaatttaagcgttggttagctgaattgctggatggtcagtcacaagctgatatc
gttgatgtggaggctgaagggtcggcgcctgcagcggcgcaggtcgacacccaatatgag
actattttgacaaaagcacagcttgatgagtgggtaactaagttaaaagcagcccagctc
atcgcttttgatactgaaaccaccagtgttaactatatgcaggcggatctagttggaatg
agctttgcggttgcaccgggcgaagcggcttacttaccaatcaatcacgattatgtggga
gcgcccgagcagctttctcaagacatagtgtttgagatcatggcaccactacttgcagat
cctcagatcaaaaaagtgggtcaaaatttaaaatatgatcaaagtgtgcttgctcgtgca
gggcttgaactgcaggggatcgcttttgataccatgttggagtcatacgtatttaacagc
gtaggaactcgccacgatatggactccttggcgctaaaatatttaggccataaaaccatt
agctttgaagatatcgctggcaaaggtaagaatcaactgacctttaaccaaatcgagcta
gaaaaggcggcaccttatgcagcggaagacgctgatattacactgagattgcatcaacac
ctctggccgttaatagaaaaagaaaatcgccttaagcaggtatttacagagattgaatta
ccgctgctgagcgtactttctcgcattgaacgtactggtgtgcacatcgatggcgatatg
ctagcgaagcaaagtatcgagattgaaaagcgcttaggtgagcttgaacaacaagctttt
gaaattgcaggtgaggagttcaacctgagttcaacaaagcaactacaagcgatattgttc
gacaaacttgagctaccagtgattaagaaaacgccaaaaggcgcgccttcaacagccgaa
gaagtgctacaagagttggcgcatgattatccactgccaaaacttattattgagcaccgt
ggcttagctaagctgaaatcaacctataccgacaaattaccaaaattggttaatgcggat
accggtcgcgtgcacacttcttaccatcaagccgttaccgcaacgggccgcctaagctca
agcgatcctaacttgcaaaatattccaatccgtaacgaagcgggacgtcgtattcgtcag
gcatttgttgccgacaataataaacaaatcgtcgcggcggattacagccaaatcgagctt
aggatcatggcacatttgtcacaagacaaagggttgttgagtgcctttgccgaaggtaaa
gatgtacacagcgcaacagcgtctgaagtgttttccgtgccgcttgaggaagtgacttct
gatatgcgccgaaaagctaaagcggttaactttggcttgatctatggcatgagtgcgttt
ggtctgtcacgtcagttagatattccaagaaatgaagcgcaacattatatggatatgtac
tttgaacgcttccctggtgtattagagtatatggagcgcacgcgtgaagaggctgctgat
aaagggtatgtagaaaccttattcggtcgccgcttgtatctaccggatatcaatgcgcgt
aatggcgctcgcagaaaagcagcagaacgtgcagccatcaacgcaccgatgcagggcact
gcggcggacatcatcaaaaaagcgatgattaaagtggatgaatggctacaaagctgtgat
agcaatgatatccagttgctcatgcaagtgcacgatgaattagtgtttgaagtacacagt
gataaagttgctgaatacagtgaaaagatctgtgagttgatgagcgctgcggcagcactt
gatgtaccgttactagttgaagccgacagtggtgacaactgggaacaagcacactag
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