Pseudoalteromonas maricaloris DSM 15914: R5H13_02280
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Entry
R5H13_02280 CDS
T09524
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R5H13_02280 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaz03019
]
R5H13_02280 (groL)
03110 Chaperones and folding catalysts [BR:
pmaz03110
]
R5H13_02280 (groL)
03029 Mitochondrial biogenesis [BR:
pmaz03029
]
R5H13_02280 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmaz04147
]
R5H13_02280 (groL)
Enzymes [BR:
pmaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
R5H13_02280 (groL)
Messenger RNA biogenesis [BR:
pmaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
R5H13_02280 (groL)
Chaperones and folding catalysts [BR:
pmaz03110
]
Heat shock proteins
HSP60 / Chaperonin
R5H13_02280 (groL)
Mitochondrial biogenesis [BR:
pmaz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
R5H13_02280 (groL)
Exosome [BR:
pmaz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
R5H13_02280 (groL)
Exosomal proteins of other body fluids (saliva and urine)
R5H13_02280 (groL)
Exosomal proteins of breast cancer cells
R5H13_02280 (groL)
Exosomal proteins of colorectal cancer cells
R5H13_02280 (groL)
Exosomal proteins of bladder cancer cells
R5H13_02280 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WOX29119
LinkDB
All DBs
Position
1:553899..555545
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVRFAGDARTKMLKGVNVLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGI
DKAVIAAVEELKTLSVPCSDAKAIAQVGTISANSDKEIGDIIAEAMEKVGRESGVITVEE
GQSLQNELDVVEGMQFDRGYLSPYFINNAEKGQVELDNPHILLVDKKISNIRELLPTLEA
VAKTSKPLLIIAEDLEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGT
VISEEIGLELEKATVEDLGTAKRVVITKDDTTIIDGAGEQEAIDGRVSQIKAQIEEATSD
YDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVAL
VRVASKLESLTGDNEDQNHGIKVALRAMEAPLRQIVSNAGDEASVVVNAVKAGEGNYGYN
AATGEYSDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMVAEIPKEEAAGPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttcgttttgcaggtgacgctcgtacaaaaatgctaaaaggcgta
aacgtactagcagacgcagtaaaagtaacactaggtcctaaaggccgtaacgttgtttta
gaaaagtcattcggcgcaccaactatcactaaagacggtgtatctgttgcgaaagagatc
gagcttgaagataagttcgagaacatgggcgcacaaatggttaaagaagttgcgtctaaa
gcgaatgacgcagcgggtgacggtactacaactgcaactgttcttgcgcaagctatcgtg
aacgaaggtcttaagtcagttgctgcgggtatgaacccaatggaccttaagcgtggtatc
gacaaagcagttatcgctgctgttgaagagttaaaaacgctttcagtgccttgttcagac
gcaaaagcgattgcacaagttggtacgatttcagctaactctgacaaagagattggtgac
atcattgcagaagcaatggaaaaagtaggtcgcgagtctggtgttatcactgtagaagaa
ggccaatcactacagaacgaactagatgtagttgaaggtatgcagtttgaccgtggttac
ctatcaccttacttcatcaacaacgctgaaaaaggccaagttgagctagataacccacat
atccttcttgtagacaagaagatctctaacattcgtgaacttcttcctacactagaagct
gttgctaaaacaagcaagccgctactaatcattgctgaagaccttgaaggtgaagcgctg
gcaactctggttgtaaacaacatgcgtggtatcgtgaaagttgctgcggttaaagcacct
ggctttggtgaccgtcgtaaagcaatgctacaagatatcgcgacactaactggtggtaca
gttatctctgaagaaattggccttgagcttgagaaagctacggttgaagacttaggtaca
gctaagcgcgtggttatcactaaagatgatacaactatcattgacggtgctggcgagcaa
gaagcaatcgatggtcgcgtatctcagatcaaagcacaaatcgaagaagcaacttctgac
tacgacaaagagaaactacaagagcgcatggcaaaacttgcaggcggtgttgcagtaatc
aaagttggcgcagcaactgaagttgaaatgaaagagaaaaaagaccgcgtagaagatgcg
ctacacgcaactcgcgcagcggttgaagaaggtgtagtacctggtggtggtgttgcgcta
gttcgcgttgcgagcaagcttgaatcgctaactggtgacaacgaagaccaaaaccacggt
attaaagtggcacttcgtgcgatggaagcaccacttcgtcaaatcgtttcaaacgcaggc
gacgaagcatcagttgtggttaacgcagttaaagctggcgaaggtaactacggttacaac
gctgcaactggcgaatacagcgacatgatcgaaatgggtatcctagacccaactaaagta
acgcgttctgcacttcagttcgcagcatcggttgctggtctaatgatcaccactgaagcg
atggttgctgaaattccgaaagaagaagctgctggtccagatatgggcggcatgggcgga
atgggtggcatgggcggcatgatgtga
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