Pseudoalteromonas maricaloris DSM 15914: R5H13_03375
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Entry
R5H13_03375 CDS
T09524
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaz03016
]
R5H13_03375
Enzymes [BR:
pmaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
R5H13_03375
Transfer RNA biogenesis [BR:
pmaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R5H13_03375
Prokaryotic type
R5H13_03375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
TubC_N
Motif
Other DBs
NCBI-ProteinID:
WOX29325
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All DBs
Position
1:808218..809255
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AA seq
345 aa
AA seq
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MKTLNYLYGKPLSDGDYKSQPEDFRVEEILDIPFTGEGEHVCLQIIKKGENTAFVAKKLA
EFAQISPRDVSYAGIKDRHGVCTQWFSVPVPIKKSVDFSTLNSDSIFVVQQIRHNRKLKT
GCHKGNRFAITLRNVTAPLDILSRINAVRQGVPNYFGEQRFGHDGHNLAMADRLFDGEKI
RDKKLRGLVLSAARSHLFNEVVSRRVAEHGLATTWHREIFLLSGSNAFFDSEIDCELIER
LLNGDILLSAPLVGKGEKGLLPQEREWLAPFAKWHEGLAEFGMKNERRALRLIPEALKVS
MADDSTLTLEFSLPKGTFATALLRELVNHKDASKKFNKHEESIQQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagacactcaactatctttatggcaaaccgttatctgacggcgattataagtcacaa
ccagaagactttagagtcgaagaaattttagatattccttttactggcgaaggtgagcac
gtttgcttgcagatcataaaaaagggagaaaacactgcatttgtcgctaaaaagcttgca
gaatttgcccaaatttcaccgcgagatgtcagctatgcaggaattaaagacagacacggc
gtatgtacgcagtggtttagcgtgccggtgccaattaaaaagtcggtagactttagtaca
ttaaatagtgactctatttttgtggtgcagcaaatacggcacaatcgaaagttaaaaaca
ggttgtcacaagggcaatcgctttgccattaccctcagaaatgtgactgctccacttgat
attctgtcgcgtattaatgccgtacgccaaggggttcctaattattttggagaacaacgt
tttggtcatgatggccacaacttagccatggcagataggttatttgacggcgaaaagatc
cgcgataaaaagctcagagggttggtactttcagccgctcgctctcatctgttcaacgaa
gtcgtcagtcgccgcgtggcagagcatggtttggcaacgacttggcaccgtgaaatcttt
ttactgagcggtagtaacgccttttttgactcagagattgattgcgaactcatcgagcgg
ttactgaatggcgacattctgctttcggcgccattggttggtaaaggtgaaaagggctta
ttgccgcaagagcgtgaatggttggctcctttcgctaaatggcacgaaggattggctgaa
tttgggatgaaaaatgagcgtagagcgctcagattaatacccgaagcgcttaaggtgagt
atggctgacgacagtacgctaacccttgaattcagtttaccaaaaggaacttttgccacg
gcgctgctcagagagcttgttaatcataaagatgccagtaaaaagtttaataaacatgaa
gagtcgatacagcagtga
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