Pseudoalteromonas maricaloris DSM 15914: R5H13_03860
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Entry
R5H13_03860 CDS
T09524
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz00010
Glycolysis / Gluconeogenesis
pmaz00020
Citrate cycle (TCA cycle)
pmaz00260
Glycine, serine and threonine metabolism
pmaz00280
Valine, leucine and isoleucine degradation
pmaz00310
Lysine degradation
pmaz00380
Tryptophan metabolism
pmaz00620
Pyruvate metabolism
pmaz00630
Glyoxylate and dicarboxylate metabolism
pmaz00640
Propanoate metabolism
pmaz00670
One carbon pool by folate
pmaz00785
Lipoic acid metabolism
pmaz01100
Metabolic pathways
pmaz01110
Biosynthesis of secondary metabolites
pmaz01120
Microbial metabolism in diverse environments
pmaz01200
Carbon metabolism
pmaz01210
2-Oxocarboxylic acid metabolism
pmaz01240
Biosynthesis of cofactors
Module
pmaz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmaz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmaz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pmaz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pmaz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
R5H13_03860 (lpdA)
00020 Citrate cycle (TCA cycle)
R5H13_03860 (lpdA)
00620 Pyruvate metabolism
R5H13_03860 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
R5H13_03860 (lpdA)
00640 Propanoate metabolism
R5H13_03860 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R5H13_03860 (lpdA)
00280 Valine, leucine and isoleucine degradation
R5H13_03860 (lpdA)
00310 Lysine degradation
R5H13_03860 (lpdA)
00380 Tryptophan metabolism
R5H13_03860 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
R5H13_03860 (lpdA)
00670 One carbon pool by folate
R5H13_03860 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmaz04147
]
R5H13_03860 (lpdA)
Enzymes [BR:
pmaz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
R5H13_03860 (lpdA)
Exosome [BR:
pmaz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
R5H13_03860 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
NAD_binding_8
GIDA
AlaDh_PNT_C
FAD_binding_2
HI0933_like
Pyr_redox_3
Thi4
DAO
FAD_binding_3
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
WOX29419
LinkDB
All DBs
Position
1:912140..913564
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AA seq
474 aa
AA seq
DB search
MSNEIKTQVVVLGGGPGGYSAAFRAADLGLDVTLIESRDTLGGVCLNVGCIPSKALLHVA
KVIDDAAEMASHGVSFGAPQIDLDKIRSWKESVIGQLTGGLGGMAKMRKVTVVNGYGKFT
GSNTIAVEGADGAKTVTFDNAIIAAGSQPVSLPFIPEDERIIDSTGALELKDVPEKLLVL
GGGIIGLEMGTVYRSLGSAIDVVEFADQLVPAADKDVIKIYQKYVKDKFNVMLSTKVVAV
EAKEDGIYVSFEGKQAPEGQVRYDKVLVAVGRTPNGKLIDADKAGVNVDERGFISTDKQM
KTNVDHIFAIGDIVGQPMLAHKAVHEGHVAAEVISGKKHYFDPKCIPSIAYTDPEIAWVG
VTEKEAKEQGLSIETAVFPWAASGRAIASARTEGSTKLIFDKESGRVIGGAMVGINAGEM
LGEIGLAVEMGADGEDLALTIHAHPTLNESIGLAAEIFEGSITDLPNKKAVKKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaaatcaaaactcaagttgttgtactaggcggtggtcctggtggttactct
gcagcattccgtgcagcagacttaggtttagacgttacactaatcgaatctcgcgacacg
ctaggtggtgtgtgcttgaacgttggttgtatcccttcaaaagcccttcttcacgttgca
aaggtaattgatgatgcagcagaaatggcttctcacggtgtttctttcggtgctccacaa
attgacctagacaaaatccgttcatggaaagagtctgtgatcggtcaacttactggtggt
cttggcggaatggctaagatgcgtaaagtaactgtagttaacggctacggtaagttcaca
ggttctaacactatcgctgttgaaggtgctgacggtgcgaaaacagtgacctttgataac
gcaatcattgcagcgggttctcagcctgtaagcctacctttcattcctgaagacgagcgt
atcatcgactctacaggtgcacttgagcttaaagacgtgcctgaaaagctacttgtacta
ggtggtggtatcatcggtcttgagatgggtactgtttaccgttcactaggttcagcgatc
gacgtagttgagtttgctgatcaactagtaccagcggctgacaaagacgttatcaagatt
taccaaaagtacgttaaagacaagtttaacgtaatgctttctactaaagtggttgctgtt
gaagcgaaagaagacggtatctacgtatctttcgaaggtaagcaagcacctgaaggccaa
gttcgttatgacaaagtactagttgctgttggtcgtacaccaaatggtaagctaattgac
gctgacaaagcgggcgtaaatgttgatgagcgtggctttatcagcactgacaagcaaatg
aagactaacgttgatcacatcttcgctatcggtgacatcgtaggtcaacctatgcttgcg
cacaaagcggttcatgaaggtcacgttgctgctgaagttatctctggtaagaagcattac
ttcgatcctaagtgtattccttcaattgcatacacagatccagaaatcgcttgggttggt
gtgactgagaaagaagcaaaagagcaaggtctaagcattgaaactgcggtattcccgtgg
gctgcttctggccgtgcaatcgcttctgcacgtactgaaggttcaactaagcttatcttt
gataaagagtcaggccgcgtgatcggtggtgctatggttggtatcaatgcaggtgaaatg
cttggtgaaatcggtctagcagtagagatgggtgctgacggtgaagacctagcgcttact
atccacgctcacccaacgctgaacgagtcaatcggtctagctgctgaaatcttcgaaggt
tcaatcactgaccttccaaataaaaaagcagtgaagaaaaagtaa
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