Pseudoalteromonas maricaloris DSM 15914: R5H13_04015
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Entry
R5H13_04015 CDS
T09524
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaz03016
]
R5H13_04015 (miaB)
Enzymes [BR:
pmaz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
R5H13_04015 (miaB)
Transfer RNA biogenesis [BR:
pmaz03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
R5H13_04015 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
SpoIVA_C
Motif
Other DBs
NCBI-ProteinID:
WOX29446
LinkDB
All DBs
Position
1:complement(945526..946959)
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AA seq
477 aa
AA seq
DB search
MSKKLHIKTWGCQMNEYDSQKMADLLDSTNGYQLTEEAEQADVILLNTCSIREKAQEKVF
HQLGRWKLLKDTNPDLVIGVGGCVASQEGDTIRQRAPFVDIVFGPQTLHRLPEMIKQVQS
KEGAVVDISFPEIEKFDRLPEPKAEGPSAFVSIMEGCSKYCTFCVVPYTRGEEVSRLLDD
VILEVAQLAEQGVREVNLLGQNVNAYRGEMHDGEICYFSDLIRYVAAIDGIDRIRYTTSH
PVEFTPDIIEAYADVPELVDHLHLPVQSGSDRILNLMKRGHTALEYKSTIRKLRKIRPNL
SMSSDFIIGFPGESNADFEATMNLINDIGFDMSFSFIYSARPGTPAADLPDDVAESEKKE
RLYLLQNRINQMAQDISRKMHDTEQRILVEGPSKKNPMELRGRTENNRVVNFEGPHSVIG
QFVDVRITEALPNSLRGELIRTEAEMDLRRDVKPSDILNKAPQEPEINELGVGTFTP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaactgcatattaaaacctggggttgtcagatgaacgagtatgactcccag
aaaatggcggatcttttggattcaacaaatggctatcagcttacagaagaagctgagcaa
gctgatgtgatcctactcaatacttgctcgattcgtgagaaggcacaggaaaaagtattc
caccaacttggtcgttggaaactactaaaagacacaaaccctgatcttgttatcggtgtt
ggtggctgcgtagcatcacaagaaggcgacaccattcgtcagcgtgcgccatttgttgat
atcgtgtttggcccacaaacattgcaccgcctaccagagatgatcaagcaggtgcaaagc
aaagaaggtgctgtcgttgatatttcattccctgaaattgaaaaatttgaccgtctccct
gaaccaaaggctgaaggcccgagtgcatttgtttcaattatggaaggttgctctaagtac
tgtactttctgtgtagtaccgtacacgcgtggcgaagaagtaagccgtcttttagatgat
gtgatccttgaagttgctcagcttgcggagcaaggtgtacgtgaagtgaacttactcggt
caaaacgtaaatgcttaccgtggtgaaatgcacgatggtgaaatttgttacttctctgat
ttaattcgctacgttgcagcaattgacggtattgaccgtattcgttatacaacatctcac
ccggttgaatttacaccagatattattgaagcctatgcggatgtgccagagcttgttgac
catttacacctaccggtacaaagtggttcagaccgtattctaaacctgatgaaacgcggt
catactgcgcttgagtacaagtcaacgatccgcaagctacgtaagatccgcccgaaccta
agcatgtcttcagatttcatcattggtttcccaggcgaatcaaacgcagactttgaagca
acgatgaacctgattaatgatatcggctttgatatgagctttagtttcatctactcagcg
cgacctggtacaccagcagccgacttacctgatgatgttgcagaatcagaaaagaaagaa
cgcctgtatcttctacagaaccgtatcaaccaaatggcgcaggatatcagtcgcaagatg
cacgataccgagcagcgtattttggttgagggcccatcgaagaaaaacccaatggaactg
cgtggtagaaccgaaaataaccgcgttgtaaactttgaaggtccacactcagtgatcggc
caattcgtcgatgtacgtattactgaggcattaccaaactcgttacgtggtgagcttatc
cgtactgaagcagaaatggatttacgtcgtgacgtaaaaccgtcggatatcttaaataaa
gcaccacaagaacctgaaattaatgaattaggtgttggtacttttaccccctag
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