Pseudoalteromonas maricaloris DSM 15914: R5H13_05195
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Entry
R5H13_05195 CDS
T09524
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaz03016
]
R5H13_05195 (truB)
Enzymes [BR:
pmaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
R5H13_05195 (truB)
Transfer RNA biogenesis [BR:
pmaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
R5H13_05195 (truB)
Prokaryotic type
R5H13_05195 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Peptidase_U40
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WOX29660
LinkDB
All DBs
Position
1:1194414..1195361
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AA seq
315 aa
AA seq
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MARRTKGRAIDGILLLNKPQGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAQLGERTTTSDSDGEIVETRPVNVTLEQLEQEIASFLGESDQ
YPSMYSALKYQGQPLYKYAREGIEVPRKCRKINVYRITLDEYDEQTQQIQMTVHVSKGTY
IRTIVDDLGEKLGCGAHVIMLHRSEVGHYPSDKMITLVELEALLEKAKAEEIAPSTYLDE
LLLPMDTALVDLSVVDISAEQGVAFGHGQTVTVENLPDGIVKVVADGKFVGIGERNPQGL
LKAKRALSSAQPESQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgcaccaaaggccgtgcgatcgacggcattctgttattaaataaaccgcaa
ggcatttcttctaacaaagcactgcagcaagcaaagggcatttatttcgctcaaaaagcg
ggccacacaggtgctctggatccgctggcaacaggtatgttgccaatttgctttggtgaa
gcgactaagtttacccagtttttgcttgataccgataaaacctacgtggtgagagcgcag
ctgggtgagcgcacgacgacatcagattctgatggtgaaattgttgaaacgcgaccagta
aatgtaacacttgagcagctagagcaagaaattgccagcttcttgggggaatctgatcag
tacccttcgatgtattcggcgctcaaatatcagggccaaccgctatacaaatatgcccgt
gaaggcatcgaagtaccgcgaaaatgccgcaaaattaatgtttatcgtattacgttagac
gagtatgacgagcaaactcaacaaattcaaatgacggtgcatgtgtctaagggcacttat
attcgtacgatagtagatgatttgggggaaaagcttggctgtggtgcgcatgtcattatg
ttacaccgtagtgaagttggtcattaccctagcgacaaaatgattaccttagtcgagcta
gaagctttacttgagaaagcaaaagcggaagaaattgcgccttcgacttatctcgatgag
ttattgctgccgatggataccgctttggtcgacttgagcgttgttgatattagcgctgag
caaggtgttgcttttggtcatgggcaaaccgttactgtcgaaaatttaccagacggtatt
gttaaagtggttgctgatggcaagtttgttgggattggcgagcgtaatcctcaagggtta
ttgaaagcaaaacgcgcgctatcttccgctcagccggaatcacaataa
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