Pseudoalteromonas maricaloris DSM 15914: R5H13_06005
Help
Entry
R5H13_06005 CDS
T09524
Name
(GenBank) FimV/HubP family polar landmark protein
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_6
TPR_14
Cas9_b_hairpin
DUF2059
Motif
Other DBs
NCBI-ProteinID:
WOX29818
UniProt:
A0A8I2H3T8
LinkDB
All DBs
Position
1:1390425..1395878
Genome browser
AA seq
1817 aa
AA seq
DB search
MRGLALFSIFVFALIATPVYTQEGVVLKGPKGVDYGAQGRSIGPIRPTDTLWRIAQKVRP
DDSVTIYQVMKALYDKNPNSFLDKNLNHMQDGAYLRIPTINEIRSVNPELAKQKSDQDDK
LWEMKRKGLLNPNAINEAEKKVTQARKVDVEEAKEDLTNQLRSLKMEQDMRLMDLQKEFK
SSVRNVEEILSENNKLKQQLGAISTELQTVRTQLGKDSEIQQQLKAVIDLQNEMIDQQAA
QAKAQESSELSTFFSSPAGIALLATLPALLAIAGLVMYLRRRNQSQTSTDDDDFLPQTPS
VAAGTAAAGAATAATAFDPEPDPLDIGMGDDEDALGASVQLDDDILPEDDEITFDSLDDD
FDEGSDTLDQDELDSLLNEDISFDDDHDEDFMQQSFDEAGDEVSLDLDDGQDILSDSDLD
DLFNESQDEEIDVSDDALAALSEELADEQADAGANDDDIDSILDGALDEEPEFSGNFDSE
SLVDADDIDALLDASQDADDDALPDFEEPSTELAGDDIDALLNEVQDDALAEIDEESDTL
DGDDIDALLDEAQEDTLPELEEESDALAGDDIDALLDEAQEDTLPELEEESDALAGDDID
ALLDEAQEDTLPELEEESDDLAGGDIDALLDEAQEDTLPELEEESDELAGDDIDALLDEA
QEDTLPELEEESDELAGDDIDALLDEAQEDTLPELEEEPSDLAGDVTDALLDESQEDTLP
ELEEEPSDLAGDDIDALLDEAQEDTLPELEEESDDLAGDDIDALLDEAQEDTLPELEDEP
DDLAGDDIDALLDEAQEDALPELEEESDDLAGDDIDALLDEAQEDTLPELEEESDELAED
ELDALVDEAPEGVLPELEEGSGELADDELDALVDETPEDVLPELKEKTDELADDELDALV
DETPEGVLPELEEKSDELAEDDLDTLVDETPEDVLPELEEESDELANNDLNALVDETPED
VLPELEEESDELADDDLDALVDETPEDDFPELEEESDELANKELDTLVDETSEDVLPELE
EESDELADDDLDALLDETPEDVLPELEEESDELVNNELDTLVDETSEDVLPELEEESDKS
ELESKQPLAESEQTESGHLSGMLDEEDAIPESSEEPVEDTLQSDLANEADFSDENVQADE
DSEFEDPDLKSVDELLQELQAEEQFELDAELEDDFSDEEVEIELGDDPLNDEVDLLAEEE
FLDEEDLQPSAELESYPELELGEELETTDSQSETEKALSEALSNDAQFDIEDGLDDDPLD
DEISGFDEDDLPEFSADFDEETLLEDEPEAPLDEAESDALESEPELEIEDELPELTADFD
EETLLEDEPEAPLDEAESDALESEPELEIEDELPELNADFDEETLLEDEPEVPIEAAEGD
TLESEPELEIEDELPELNADFDEETLLEDEPEAPLDEAESDALESEPELEIEDELPELNA
DFYEETLLEDEPEAPVEAAESDVLESEPELEIEDELPELNADFDEETLLEDEPEAPLDEA
ESDTLESEPELEIEDELPELNADFEEETLLEDEPESPVETAESDVLESEPELEVEDELPE
LNADFDEETLLEDEPEAPVEAAESDVLESEPELEVEDELPELNADFDEETLLEDEPELEI
EEALPELNDEDDLETLLSEPQTESELPEVNEAEIEKEFMADFTQADFDALLSELDDPSDF
DAGNAEDFEVDFDSLLQDELVVGEAQALSTDVEGSEDYLEIEDLLEQSDDLDSDVEPYVG
ANMDVGLGDFEELLAGENTTDVDLEDEGFAAKLDLAKAYIEIQDYDSAISTLNDVIENGP
DSVQAEAKSLKSSLTES
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtttagccttatttagtatctttgtattcgcactgattgccacaccagtatat
acccaagagggggtagtgctaaaaggccctaaaggggttgattatggggctcaaggtcgg
tcaatagggcctatcagacccacggatacattgtggcgtatagcacaaaaagtgcgacca
gatgactcggtcaccatttatcaggtgatgaaggcgctttacgataaaaatcctaattca
tttctagataaaaacctcaaccatatgcaggatggggcgtatttacgtattcctaccatt
aatgaaattcgcagtgtaaaccctgagttggcaaagcagaagtcagatcaagatgacaaa
ctttgggaaatgaagcgtaagggattattgaatccaaatgcaataaacgaagctgaaaaa
aaggttacacaagctcgtaaagtcgatgtagaagaagctaaagaagacctaactaatcaa
ctgcgttctttaaagatggaacaggacatgcgcctgatggacttacaaaaagagttcaaa
tcctcggtgcgtaatgttgaagaaatcctatccgaaaacaataaattaaaacagcagctc
ggcgctatttctactgaacttcaaacggttcgtacccaacttggtaaagacagcgaaatc
cagcaacagcttaaggctgttattgacttacaaaatgaaatgattgaccagcaggcagct
caggcaaaagcgcaagaaagtagcgagttaagcacattctttagctcaccagctggcatt
gcattacttgccacattaccagcgctactggcaattgctggattagtaatgtacctacgc
cgaagaaaccaatctcaaacgtcgacagatgacgacgattttcttccgcaaacaccatcg
gtggctgcaggcactgcggcggcgggagctgcaaccgctgcgactgcatttgaccctgag
ccagacccacttgatatcggaatgggcgacgatgaagacgcactgggcgcaagcgtacag
ttagatgacgatatcttacctgaagacgatgagattacctttgactcacttgatgacgac
ttcgatgaaggaagtgatacgttagaccaagatgaattggatagcttactaaacgaagat
atttcgtttgatgatgatcatgacgaagactttatgcaacagagctttgacgaggctggt
gatgaagtttcgcttgatcttgatgatggccaagatattttaagtgacagcgatcttgat
gatttgttcaatgagtctcaagatgaagaaattgatgttagcgatgatgcccttgccgct
ctgagcgaggaactcgcagatgagcaagcggatgctggtgcaaacgatgatgatatcgat
tcaattcttgatggtgcgctagatgaagagcccgaatttagcggtaattttgatagtgag
agcttagtcgatgctgatgatatcgatgcgctacttgatgcctctcaagatgctgacgat
gatgcattgccggattttgaggaaccaagcactgagcttgcgggtgatgatattgatgcc
ctgttaaatgaagtgcaagacgatgcgttagctgaaattgacgaagagtcagatacgctc
gacggtgatgatatcgatgctttattggatgaagcgcaggaagatacgttgccggaatta
gaagaagagtcagatgctctcgctggtgacgacatcgatgctttattggatgaagcgcag
gaagatacgttgccggaattagaagaagagtcagatgctctcgctggtgacgacatcgat
gctttattggatgaagcacaggaagatacgttgccggaattagaagaagagtccgacgat
ctagctggtggcgatatcgatgctttattggatgaagcgcaggaagatacgttgccggaa
ttagaagaagagtctgatgagctcgctggtgacgatatcgatgctttattggatgaagcg
caggaagatacgttgccggaattagaagaagagtctgatgagctcgctggtgacgatatc
gatgctttattggatgaagcgcaagaagatacattgccggaattagaagaagagcctagt
gatcttgctggtgacgttactgatgctttattggatgaatcgcaagaagatacgttgccg
gaattagaagaagagcctagtgatctagctggtgacgatatcgatgctttattggatgaa
gcgcaagaagatacgttgccggaattagaagaagagtccgatgatttagctggtgatgat
atcgatgctctattagatgaagcgcaagaagatacgttgccggaattagaagatgagcct
gatgatctagctggtgacgatattgatgctttattggatgaagcgcaagaagatgcgttg
ccggaattagaagaagagtccgatgatctagctggtgatgatatcgatgctttattggat
gaagcgcaagaggatacattgccggaactggaagaagaatctgatgaactggccgaggac
gaactcgatgcattagttgacgaagcgccagaaggtgttttgccagagctggaagaagga
tctggtgaactggccgatgacgaactcgatgcactagttgacgaaacaccagaagatgtt
ttgccagagctgaaagaaaaaactgatgaactggccgatgacgaactcgatgcattagtt
gacgaaacaccagaaggtgttttgccagagcttgaagaaaaatctgatgaactggccgag
gacgatctcgatacattagttgatgaaacaccagaagatgttttgccagagctggaagaa
gaatctgatgaactggcaaataacgatctcaatgcattagttgatgaaacaccagaagat
gttttgccagagctggaagaagaatctgatgaactggccgatgacgatctcgatgcatta
gttgatgaaacaccagaagatgattttccggagctggaagaagaatctgatgaactggca
aataaggaactcgatacattagttgacgaaacatcagaagatgttttgccagagctggaa
gaagaatctgatgaactggccgatgacgatctcgatgcattactagacgaaacaccagaa
gatgttttgccagagctggaagaagaatctgatgaactggtaaataacgaactagataca
ttagttgacgaaacatcagaagatgttttgccagagctggaagaagaatctgacaagtct
gaactggagtctaaacagcctttagctgagtctgagcaaacggagtcaggacacttgtcg
ggtatgttggatgaagaggatgctattccggaatcatctgaagaaccggtggaagataca
ttacagtccgatctagccaatgaagcagattttagtgatgaaaatgttcaagctgacgaa
gacagcgaatttgaagatcctgatttaaaaagtgttgatgagctattacaggagcttcaa
gccgaagaacagtttgagttggatgctgaacttgaagacgacttctcggatgaagaagtt
gaaattgagctgggagatgatccacttaatgacgaagtggatttactggcagaagaagag
tttcttgacgaagaagatctgcaaccaagcgcagagctagagagttaccctgagctggag
ctcggcgaagaacttgaaactactgactcgcaaagcgaaaccgaaaaggcattatcagaa
gcattatccaatgacgctcaatttgatatagaggacgggcttgatgacgatcctctcgac
gatgaaatctctggctttgatgaagatgatttgcctgaatttagtgcagatttcgacgaa
gagactttgcttgaagacgaaccagaagcaccactcgacgaagctgaaagtgatgcgctt
gagtctgaacctgaactggaaatcgaagatgagctgccagagttaactgcagatttcgat
gaagaaactttgcttgaagacgaacctgaagcaccgctcgacgaagctgaaagtgatgcg
cttgagtctgaacctgagcttgaaatcgaagacgagctgccagagttaaacgcagatttc
gatgaagagactttgcttgaagacgagcctgaagtaccaatcgaagcagcggaaggtgat
acgcttgagtctgaacctgaactggaaatcgaagacgagctgccagagctaaacgcagat
ttcgatgaagagactttgcttgaagacgaaccagaagcaccgctcgacgaagctgaaagt
gatgcgcttgagtctgaacctgagcttgaaattgaagacgaactgccagagttaaacgca
gatttctatgaagagactttgcttgaagatgaacctgaagcgccagttgaagcagcagaa
agtgacgtacttgagtctgaacctgaactggaaatcgaagacgagctgccagagctaaac
gcagatttcgatgaagaaactttgcttgaagacgaacctgaagcaccgctcgacgaagct
gaaagtgatacgcttgagtctgaacctgagcttgaaatcgaagacgagctgccagagtta
aatgcagatttcgaagaagaaactttgcttgaagatgaaccagaatcaccagtcgaaaca
gccgaaagtgacgtgcttgagtctgaacctgaactggaagttgaagacgaactgccagag
ttaaacgcagatttcgatgaagagactttgcttgaagatgaacctgaagcgccagttgaa
gcagcagaaagtgacgtacttgagtctgaacctgaactggaagttgaagacgagctgcca
gaattaaacgcagatttcgatgaagagactttgcttgaagacgagcctgagcttgaaatt
gaagaggctctgccagaattaaacgatgaagatgacttggaaactctactttctgagcca
caaactgaatctgaattaccagaggtcaatgaagccgagattgaaaaagaatttatggct
gactttacccaagcagacttcgatgctctactcagcgaactggacgatcccagtgacttt
gacgccggaaatgcagaagattttgaagtagatttcgatagcttgctacaagacgaattg
gtcgtaggggaagcccaagcgctatcaacggacgtcgaaggttcagaagactacttagaa
attgaagacctacttgaacaaagcgacgatcttgatagcgatgttgaaccttacgttggc
gcaaatatggacgttgggcttggcgattttgaagagctattagcgggtgaaaataccacg
gatgttgatttagaggatgaaggatttgccgctaaattagatctagcaaaagcttacatc
gaaattcaagattatgactcggctatatcaacgctcaacgatgttattgagaatggcccg
gattcggtgcaagctgaggctaagtcgcttaaatcaagtcttacagagtcttaa
DBGET
integrated database retrieval system
