Pseudoalteromonas maricaloris DSM 15914: R5H13_06470
Help
Entry
R5H13_06470 CDS
T09524
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz02020
Two-component system
pmaz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R5H13_06470
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
R5H13_06470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaz03000
]
R5H13_06470
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pmaz02035
]
R5H13_06470
Transcription factors [BR:
pmaz03000
]
Prokaryotic type
Helix-turn-helix
Other families
R5H13_06470
Bacterial motility proteins [BR:
pmaz02035
]
Flagellar system
Flagellar assembly proteins
Others
R5H13_06470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
HTH_50
AAA_5
Mg_chelatase
AAA
AAA_16
AAA_7
MCM
bpMoxR
TIP49
DUF6946
Motif
Other DBs
NCBI-ProteinID:
WOX29906
LinkDB
All DBs
Position
1:1498276..1499715
Genome browser
AA seq
479 aa
AA seq
DB search
MVLILDNNNKRAIGLGAALSFVGQANEVLAEERYEPKILDNNQEPIFVLGALQSLTHEAL
IKSHPAVPFLLIGETLRPLLALPNVIGLITEPFGQEVTMQLLHDCQQYLRMLPNKENKLL
NKSFDGLVGETEAVKNVRFLISQVAKTDANVLILGESGTGKEVVARNVHLLSKRAQGPFV
PVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAQGGTLFLDEIGDMPLQMQVKLL
RVLQERTYERVGGTKPIQADVRVIAATHRNLETMIEDGKFREDLFYRLNVFPIENPSLNE
RAEDIALLLKELTRRVNEQTGNSVKFTDRAVDSLKSHAWPGNIRELANLVERMVIMFPDK
VVDVTDLPQKYRYIEVEAFEPEYPEELLEKDAFNELFSDGFSDDEEDMVAEDFAPQASNV
GLLPDEGIELKEYLAELEIDLITQALERYDYVVARAAEILGVRRTTLVEKMKKYNLNRD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgatcttagataacaacaacaaaagagcgatcggattaggtgcggcacttagt
tttgtcggtcaagcaaatgaagtgctggccgaagagcgttatgagcccaagatccttgat
aacaaccaagaaccaatttttgtgctaggcgctttgcaaagcttaacacacgaagcgttg
ataaaatctcatcccgccgtcccgtttttattaataggtgaaacgctcaggccgctactt
gcattaccgaatgtaatagggcttatcaccgaaccctttgggcaagaagtcacgatgcaa
ttgctacatgactgccagcaatacttgcgtatgcttccaaacaaagagaacaagctacta
aataagagctttgatggtttagttggggaaaccgaagcggttaaaaacgttcgtttcttg
atttctcaagtggctaaaaccgacgccaatgtccttattttgggtgaatcgggaaccggt
aaggaagtggttgcacgtaacgtacacctattgtctaaacgtgcgcagggaccatttgtg
ccagttaactgtggtgctatccctggggagttgttagaaagcgagctttttggtcatgaa
aaaggcgcgtttactggcgcgatttcagccagaaaagggcgctttgaactggcgcaagga
ggtacgctttttctcgatgaaatcggtgatatgccactgcaaatgcaggtgaaattgtta
cgagttttacaagaacgcacctatgaacgagtagggggcacaaagccgattcaggcggat
gttcgtgtgattgccgcaacgcaccgtaatcttgaaaccatgattgaagacggcaagttt
cgcgaagacttattttatagactcaatgtattccccattgaaaacccctctttaaacgag
cgtgcggaagatattgcgctactgctaaaagaactaacacgtagagtaaatgaacaaacg
ggcaattcggttaagtttactgatagagccgtagacagcttaaagtcgcacgcttggcct
gggaatattcgagagcttgcaaaccttgtggaacgaatggtgattatgttcccagacaag
gttgtcgatgtgactgatttaccacaaaagtaccgttatatagaagtcgaagcgtttgag
cctgaatatccagaagaacttttggaaaaagatgccttcaacgaactatttagcgatggt
tttagtgacgatgaagaggatatggtagcagaagattttgcgccgcaagcatcgaatgtt
ggcttactgccggacgaggggatagagttaaaagaatatttagcagagcttgaaattgat
ttgatcactcaagctttagagcgctacgattatgtggttgctcgcgcggctgaaatcttg
ggcgttcgccgtacaacattagttgagaagatgaaaaagtataatctcaatcgcgactga
DBGET
integrated database retrieval system
