Pseudoalteromonas maricaloris DSM 15914: R5H13_07615
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Entry
R5H13_07615 CDS
T09524
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmaz01002
]
R5H13_07615
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
pmaz02042
]
R5H13_07615
Enzymes [BR:
pmaz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
R5H13_07615
Peptidases and inhibitors [BR:
pmaz01002
]
Metallo peptidases
Family M9
R5H13_07615
Bacterial toxins [BR:
pmaz02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
R5H13_07615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
PKD_4
PKD
K319L-like_PKD
Big_9
Sde0182_C
Motif
Other DBs
NCBI-ProteinID:
WOX30116
LinkDB
All DBs
Position
1:1746570..1749368
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AA seq
932 aa
AA seq
DB search
MMKITKLTLALSALTAINSANAHQESQRLFKPLDASVQVETNISHGHEHKNLHDRAPVAH
TPTRSMPLLSAKHTPLLQAMAVSQSEAIAACDLNSLASASSSQIVTEIKQQGTSCINALF
SADSSIQTQVFTSDKMYAAAQNAKSLSQSYSGNGSADLEALYLFIRAGFYVEFYNDQVTF
ATWVKPAVKDALDAFVGNSHFYDDNDAHGKVLGEAITTMDSSELQGHYLPVVKAWLSKWN
ESYAQKWNMRSAVNGIFTILYRGQWNDNFVALVKNDQQLVSLLGSFTAQTWMVNSDSEYL
IINAASELARLKLYNGAAIQESVDTQLTALFSRYNSYGFGDGVWLAAADVATYYADCGQF
GICNFDKELESKVLSQQHSCSDTIKIRAQALTAQQLTSACQTMEAEEGRFHTMLETGRLP
VADDNNDFLQVNIFNSSADYKKYAKAIFKISTDNGGMYLEGNPSDVNNVANFVAYEASYA
KPDHYIWNLEHEYVHYLDGRFDLYGDFNAPTKPIVWWSEGVAEYIANLNDNQAAIDTIKD
GSVYTLAEIFSTTYDGFDQDRIYRWGYLGVRFLYEKHFDEVLAMRQETRQANWNAYQARM
DRLASQYQAEFVQWCNELAAGGQNNAPTSEVNGPYSGDVNQAILFSSQGSVDPDGDVLTY
LWRFGDGSQSNEANPTHSYVQAGEYQISLTVSDPSGLNHTSNTVATVSATTSNKLQSGVP
VTVAGEQDEQVAFSIDVAAGTDKLVISMSGGTGDADLYVKLGSAPTFSEYDCRPYQSGNE
EVCEITTPAAGTYYIMLHGYNRFENVQLLGEIATNSTIEDVCQSQGSVSNGRLAADETIC
LGSQEPMWFSLENVSGQQSVVIKTAHGSGDLGLEYSNAGWPNGTNVDASSFNQGNQECIE
ISAQSEYWGYLKVSGAPTGAALKVSYNKDGCQ
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaattacaaaactcactttggcgttatctgcgcttacagcgataaattcagcc
aacgcacatcaagaatcacagcgactctttaagccgctcgatgcatcggttcaagtggaa
acgaacatttcccatggccatgagcacaaaaatttgcatgatagagcacccgttgcacat
acaccaactaggagcatgccgctgttatctgctaaacacacgccattattgcaagcgatg
gcagtaagccaaagtgaagcgattgctgcatgtgatttaaatagcttagcaagtgcgagc
agtagccaaattgttactgaaataaagcaacagggtacgagctgtatcaatgctttgttc
tccgctgacagcagcatccaaacacaagtattcacttcagataaaatgtacgctgcggcg
caaaatgccaagtcgctttcgcaaagctattcaggcaacggcagtgccgacctcgaagcg
ctttatttatttattcgcgctggcttttatgttgagttttacaatgaccaagtgactttt
gctacttgggttaagcctgcggtgaaagatgcgttggatgcttttgttggtaatagccat
ttctacgacgacaatgatgcacacggtaaagtactcggtgaggctattactacaatggac
tcatcggaactacaggggcactatctgccagttgtaaaagcatggctatctaaatggaat
gaaagttacgctcaaaagtggaatatgcgcagtgcggtaaacggcattttcactatctta
tatcgaggtcagtggaatgataactttgtcgctttggttaaaaacgatcaacaattggtg
agtttactagggagcttcaccgcacaaacttggatggtaaattcagactctgaatatcta
atcatcaatgctgcgagcgaattggctcgacttaaattatacaatggtgcagctattcaa
gagtcagtcgacacgcaattaaccgctttattctcgcgttataacagttatggttttggc
gatggtgtctggttagctgcggctgatgtcgcgacctattatgctgattgtggccagttt
ggtatttgtaattttgataaagaacttgagagcaaagtactttctcaacaacatagttgt
agcgatacaataaagattagagcacaagcactcaccgctcagcaattgacttcagcgtgt
caaaccatggaagcggaagaagggcgattccacaccatgctggaaacaggccgcttaccg
gttgccgatgataacaatgattttctgcaagtgaatatctttaatagcagtgcagactat
aaaaaatatgccaaagccatttttaaaatcagcaccgacaacggtggtatgtatttagag
ggtaatcctagcgatgtgaataacgttgctaattttgttgcatacgaggccagttatgca
aagccggatcattacatctggaacttagagcatgaatacgtacattatcttgatgggcgt
tttgatctttatggtgactttaatgctccgactaagcctatcgtttggtggagtgaaggg
gtggctgagtacattgcaaacctcaatgataatcaagccgcaatagatacaatcaaagat
ggctcagtatatacgctagccgaaatattcagtacgacgtatgacggttttgaccaagat
agaatttaccgttggggttatttaggggtgagattcctgtatgaaaaacactttgatgaa
gtgctcgcaatgcgacaggaaacgcgacaagcaaattggaatgcgtaccaagcccgtatg
gaccgcctcgcatcacagtatcaagcagagtttgttcaatggtgcaacgagcttgctgct
ggtggtcagaataacgcacccacttcagaggttaatgggccatactccggcgatgttaat
caagcgatactattttcaagccaaggtagtgtcgaccctgatggtgatgtactcacttat
ctgtggcgttttggtgatggtagccagagtaatgaagccaatcccacgcacagttatgtg
caagcaggcgagtatcaaattagcttaacggtgagcgatcctagcggtttgaatcacact
agtaatacagtggctactgtaagcgcaacgacttcaaacaaactacagtctggcgtacct
gtcacggttgcgggcgagcaagatgaacaagttgcattttcaatcgatgtcgctgctggc
actgataaattagtcatcagcatgtctggaggtacaggtgatgccgatctttacgttaag
ttgggctcggcgccaacgttcagcgagtatgattgcagaccataccaatccggtaacgaa
gaggtatgtgaaatcactacacctgccgctggcacctattacattatgctgcatggttat
aatcgctttgaaaatgtgcagttgttaggagaaatcgcaacaaattcaacaatagaggac
gtatgtcagtcgcagggtagtgtctctaatggtagattagcagcggatgaaacaatttgc
cttggaagccaagagccgatgtggtttagccttgagaatgtaagtggtcaacaatcggtg
gtgataaaaactgcccatggtagtggtgatcttgggcttgaatacagcaatgcaggatgg
ccaaatggcactaatgtggatgcaagctcgttcaatcaaggtaaccaagagtgcattgag
ataagtgcgcaatctgaatattggggatacttgaaagtgtcaggcgcaccaacgggggca
gcgctgaaagtgtcttataacaaagatggttgtcagtaa
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