KEGG   Pseudoalteromonas maricaloris DSM 15914: R5H13_09050
Entry
R5H13_09050       CDS       T09524                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pmaz  Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pmaz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    R5H13_09050 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmaz02044]
    R5H13_09050 (tssM)
Secretion system [BR:pmaz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   R5H13_09050 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical MMR_HSR1
Other DBs
NCBI-ProteinID: WOX30387
LinkDB
Position
1:2079415..2083125
AA seq 1236 aa
MSGVNRSGLVHLVLGFLSSRATAHWVGIFAILTLIWFAGRFIGLEDQNHRLMVMGAVFGL
FCLTLLVRWLWVKRSGDKLAKEIANNHAGTEAEVEEIKAKMEEALSALKASHLGAGYRGN
AALYALPWYMIIGPSAAGKSTLFANSGLHFPYSKSNQLHIQGFGGTRNCDWWFSDQAVLI
DTAGRYTTEESDNDQWLSFLKLLRKYRSKQPINGVMVAISVADILTSDSEQIRDHVKQIR
ARIDELINQLGLIFPVYVVFTKCDLISGFEPFFNELSEDERKQPWGAYLLEEDGTNTGEV
ASENFSKHLTGLYERLCDQRLVKMTRERNAQRKQLIYDFPNQFKAASAKVEEFIDTLFKE
NPYQEVPWFAGVYFTSGTQEGTPIERSATSKLSTFRSVLFEYRQESITSAFFINQVFKDV
LFKLQDLTRGNRKKRRVQKWLKGFALCLCVTSVFALAGLLVNSYTHNQQLLTTSDKLTTA
VVNTRVENQPLAEQFNSTLSLFAHYQELIGYEKKLPWYFLLGVYSADNTIKPIEQVLRQR
VQALIGEPSSELVQQALFESHQNWIALLSTEEQVAKRIEPKLRDKYYQALKLQLMMSNEF
ERLNKDYAKSELLDYTADRLELTLNEDTQALTEQLSGLIDFYLAQLAVEPTPQQLAIWQN
NDFLVSQARSDLMSAPEPTALYEQIKAKVTVSKAALTLDQMMQQNNKTFLQSKISIPYVY
TKEAWENEVYDAIKVIASKAFSGDWVMGTDNAESQGSVDEAKASALVKSIRALYFRDYAN
VWFEFLNSVEISPFNTSNAASLTLAQLSSPEGPLVDLMASIDDNVNLIDSPNKTVETEKL
TEQANALLAKSKNSKVKGAKIEAAARKRVPELSSRFADLRRYTAKGEENARSDYLEQYLG
ALSAFHSDIKTIAASNNDDYMAMSFTQTLLNGDSKNHALQSAWVVVESQVRALDPDTKQA
LEKLLKAPLLASVQTVMNEAKVQLNERWSNQVFLTYKENIRGKYPFNIDGPDAAVEDISE
LLNQESGVFWQFMAENLSPYLRLKRGEWVEKTWNGIGIGFKPGVLDKLTKARKVTRSLFP
RDGSEVGISFQMMPVAQKGLKETYIGFSDQNYRYRNEPEEWRRFNWPARAGTEKAVVYGL
DSEGRRIEIEKSGPWAFLKVLNEANVQWVRGTEFMATWQLQREAEESIEPIQVQVALKSS
RNSGIFSKYFMTSFALPESLFDTKVSVASNENLALR
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgtcaggagtaaatcgtagtggactagtgcatctagtcttaggatttttgtcatctcgt
gcgacggctcattgggtcggcatattcgcaattttgacgctaatttggtttgctggtcgg
tttattggccttgaagatcaaaatcatcgtttaatggtgatgggtgcggtatttggtctg
ttttgtcttactttattagttcgatggttgtgggtgaagcgctctggtgacaagttagcg
aaagaaattgccaataatcatgcggggacagaagccgaagtcgaagaaattaaagccaaa
atggaagaagcgctgtctgcattaaaagcttctcatttaggcgctggctatcgtggtaat
gctgcgttgtatgcattgccttggtatatgatcattggtccgtcggctgcgggtaagagt
acgttatttgcgaattctgggctgcatttcccttattcaaaatctaatcaactgcatatt
caaggttttggtggcacacgtaattgtgactggtggttttcagatcaagctgttttgatt
gatactgcaggtcgttataccactgaagagtcagataatgatcaatggttgtcattctta
aagctgttacgtaaataccgctctaaacagccaatcaatggggtgatggtggcgattagt
gttgccgacatcttgacctcagacagcgaacagatccgcgaccacgttaaacagatccgc
gctcgtattgatgagttaattaaccaacttggacttatctttccagtatacgtggtgttt
accaaatgtgatttgatcagcggctttgagcctttctttaatgaattaagtgaagatgag
cgtaaacaaccttggggcgcgtatttacttgaggaagatggcaccaataccggtgaagtg
gcgagcgagaacttttcaaaacatctaactggcctatatgagcgattgtgtgatcagcgt
ctagttaaaatgacgcgtgaacgtaacgcccaacgtaaacaactgatttatgattttcct
aatcagttcaaagcggcgtctgccaaagttgaagaatttattgacacattatttaaagaa
aacccgtaccaggaagtaccgtggtttgctggtgtgtattttacctctggtacgcaagaa
ggtacgcctatcgagcgtagcgcaacgagcaaactatctacgtttagatctgtattgttt
gagtatcgccaagaaagcattacctccgcgttttttatcaaccaagtattcaaagatgtg
ttgtttaaattgcaagatctcactcggggtaaccggaaaaagcgccgcgtacaaaaatgg
ctcaaaggctttgcattatgcttgtgtgtgacgtcggtatttgctcttgcgggcttgttg
gttaactcttatacccacaatcaacagcttttaacaaccagtgataaattaacgactgct
gttgttaatacacgagttgaaaaccagccgttggcagagcaatttaactcaactttgtct
ctttttgcacactatcaagagctaatcggttatgagaaaaagctgccttggtatttctta
ctcggggtttacagtgcagataacactattaagccaatagaacaggtattacgtcaacgt
gtacaagcgctcattggcgaaccaagttcggagcttgtgcaacaagcactttttgaaagc
caccaaaactggattgcactgctaagtacagaagaacaggtagctaaacgtatcgagcca
aagctacgtgataagtactatcaagcacttaagctgcaactcatgatgagtaacgagttt
gagcgtttaaataaagactatgcgaagtctgagctactggactacacggcggatcgctta
gagctaacgctaaacgaagacacgcaagcattaacagagcaactgtcaggattgattgat
ttttacttagctcaattagcagttgagcctacaccgcagcagcttgcgatttggcagaat
aatgatttcttggtgagtcaggcgcgttcagacttaatgagtgcaccagaaccaaccgcg
ttatatgagcagatcaaagcaaaagtaacggtatcaaaagccgcactaacgcttgatcaa
atgatgcagcaaaacaacaaaacctttttgcagtctaagatcagcattccatacgtttac
accaaagaagcatgggaaaacgaagtgtacgacgccatcaaggtcattgcgagcaaagca
ttctctggcgactgggtgatgggcacagacaacgcagaaagccaaggctctgttgatgaa
gcaaaagcaagcgctttggtcaaatcaatccgcgcgctgtatttcagagactatgccaat
gtgtggtttgagttcttaaactcggtagaaataagcccgtttaatacgagtaatgcagca
agtttaacgctagctcagctgtcgtcaccagaaggtccgttggtcgatttaatggcgtca
atcgatgacaacgtgaatctaattgattcaccaaacaaaacggtagaaacagaaaagttg
accgagcaagctaatgcgttacttgcaaagtctaaaaacagcaaggttaaaggtgcaaag
atagaagccgctgcgagaaagcgtgtacctgaactgtcgagtcgctttgcagatcttcgt
cgctatacggcaaaaggagaagagaacgctcgctctgattacctagagcaatatctcggt
gctttgagtgcatttcattcagacatcaaaacgattgcggcgagtaacaatgatgactat
atggcgatgtcatttactcaaacgctgttaaatggtgatagcaaaaaccatgcgctgcaa
agtgcatgggtggtggtcgaaagccaagtcagagcgcttgacccagatactaagcaagca
cttgaaaaactactaaaagcaccccttttagcgagtgtgcagactgttatgaacgaagca
aaagtacagcttaatgagcgttggtctaatcaggtattcttaacatacaaagaaaatatc
cgtggtaaatatccgttcaatatcgacgggccagatgcagcagttgaagatattagtgaa
ctgctgaaccaagagtcaggtgtgttctggcaatttatggctgagaatctatctccctac
cttcgtttaaaacgtggtgagtgggtagagaaaacctggaacggtatcggcattggcttt
aagccaggagtactagacaagctaactaaggcgagaaaggtaacgcgttcgctatttcct
cgagacggttctgaggtagggattagcttccaaatgatgcctgtggcacaaaagggatta
aaagaaacttatatcggctttagtgaccaaaattaccgttatagaaacgaacctgaagag
tggcgtcgttttaactggcctgctcgtgcgggcactgaaaaagcagtggtatatggttta
gacagtgaaggccgtagaattgaaatcgaaaagtcagggccttgggcattcctaaaagta
ttgaatgaagcgaatgtgcagtgggttcgtggtactgaatttatggcaacgtggcaatta
caaagagaagcggaagaaagtattgagccaatccaagttcaagttgcacttaagtcgagc
agaaacagcggcatattcagcaaatattttatgacgtcatttgcgctgcctgagtctttg
tttgataccaaagtgagtgtggcttccaatgaaaacttggcgttgaggtaa

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