Pseudoalteromonas maricaloris DSM 15914: R5H13_11485
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Entry
R5H13_11485 CDS
T09524
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R5H13_11485 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaz03400
]
R5H13_11485 (recC)
Enzymes [BR:
pmaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
R5H13_11485 (recC)
DNA repair and recombination proteins [BR:
pmaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R5H13_11485 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WOX27292
LinkDB
All DBs
Position
1:complement(2625948..2629205)
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AA seq
1085 aa
AA seq
DB search
MLHIIQSNRMEILQAQLCTLIKSAPLTNPFAKEVVLVQSPGMSEWLKLGMSQHLGISAQV
DFPLPSSFIWKLYQNFIDDVPKESAFNKSNMTWKLFTLLPDCIDKPQYIALKHYLGDDPS
GIKLFALCEKIADVFDQYLMYRPQWIELWDQGQDTLIDVDVEAIAPWQPDLWRRLVHHVE
ALEQSSYHRTNMHDQLLQGLANAPEGKLPERICIFGLSAISTSQLDIFQALGQKTNVFLF
FFNPSEHYWGDLVDEKTQAKVAAKYAKMPELEAKDGEYYYIGNPLLSSWGKLGRDYFEQL
LQLDASWIDGFDDAFDDSLLGQVQQEIYQLAFKGESLTADPNWFVSQQGKLPIMADDTSI
VFQDCHTPLREVERLHDYLLNLFEQNPSLTPKDIIVMMPDVGTYSPFIKAVFDSSEDRLR
IPYAISDLAIEQERPILTSFVTLTDLPNNRFCVSDILDLLGVLPIAEQFNLESHEFDLIR
YWLDQVSVKWGLNDSHKSEYGLPKIPLNTWQHGLNRLLLGVATNDEQTPFASIYPADEVE
GMSVAVLNKLIGFVDALIWLKRQLSSEKTLTNFAAILREAMALFYSSDSEQSWDLLKLEQ
IIENIEKHHENGDIQAPVSAKILAYLVKQGVREKGVGQRFLAGAVNFCTLMPMRAIPFKV
VCMLGLNDADYPRTVQPIGFDLVAHSTRRKGDRSRKLDDRYLFLEALLSARENLYISYIG
RSCFNNEAQVPSVLVSELTEYLDRSFYFEDMPKQSLVTRLTSQLPLQPFNPEHFKAGSLQ
SYNRTWLWQHRAVQADEIKPLAPVLDAEIEFSDLLRGVCEPQKLFYQQALGIKLKPIEAL
TLDEEPFALDALERYQYLDEVLDAQLQQQPLNLEQILQRGSLPQANIGKLQLEGLLTRVE
PMVNVLAPLLNEPKEPLELKLGVAEHILVGWLDCVYDNRQVYYRSASIKAKDLIKGFLHH
CAACVMGHEVTTYIVGLDQSVHFAAISKPQAQQYLEQWLAFYKQALSEPVAFFPSSSMEY
AKTQDIKKAVNKFKPQYVGRGEGEDPYVQLCFSDLSAHEARFCALSLTLLTPILDAAEEV
RHGDA
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgttacacatcatccaatcgaatcgaatggaaatcttgcaggcgcaactctgcacactc
ataaaatcagcaccactcactaacccttttgcaaaagaagtggtgttagtacaatctcct
ggtatgtctgaatggctcaaactaggtatgagtcagcacttaggaataagtgcacaggtc
gactttccattaccatctagcttcatttggaagctataccaaaatttcattgatgatgtt
cccaaggaatccgcttttaataaaagcaatatgacttggaagctatttacgctgttacct
gactgcattgataagcctcaatatattgcgcttaagcactatttaggtgacgacccgtca
ggaattaaactctttgccctgtgtgaaaaaattgccgacgtttttgaccaatatttaatg
taccgcccccagtggattgaactttgggatcagggccaagatacgcttatagatgtggat
gttgaagccatcgccccttggcagcctgatctctggcgtcgtttagtccaccatgttgaa
gcacttgaacaaagttcatatcaccgtaccaacatgcacgatcagttactgcaagggctg
gccaatgcaccagaaggcaaacttcccgagcggatctgtatatttggactgtcggccata
tcgaccagtcagcttgatatttttcaagcgcttggccaaaaaacgaatgtatttttattc
ttttttaaccccagtgaacactactggggagatttagtcgatgagaagactcaagctaaa
gtcgctgcaaaatacgccaagatgccagaactcgaagcgaaagacggcgagtattattac
attggcaatccactcctttcttcatggggaaagcttgggcgtgactattttgagcaatta
ttgcagcttgatgccagttggatagatggatttgatgacgcgtttgatgacagcctgctt
ggccaggtacagcaagagatctatcagttggcatttaaaggagagtcgttaaccgcggat
ccaaattggtttgtttcgcagcagggcaagttacccattatggcggatgataccagtatc
gtttttcaggattgccacacgccactgcgtgaagtcgagcgactccatgattatttactc
aatctgtttgaacaaaatccaagcctgacgcctaaagacattatcgtcatgatgcctgat
gtgggcacctattcgccatttattaaagcggtatttgacagcagtgaagatagactacgg
atcccttatgcgatttccgatcttgcaatcgagcaagagcgtcctattttaacgtctttt
gtgacactgacagacttacccaataaccgtttttgcgtgtcggatattctcgatttgttg
ggcgttttgccgatcgccgaacagtttaaccttgaaagccatgagtttgacttaattcgc
tattggcttgatcaggtcagtgttaaatggggcttaaatgacagccataaaagcgaatat
ggcttgccaaaaataccactaaatacgtggcagcatggactcaaccgtttgctattaggg
gttgcaacaaacgacgaacagacgccgttcgcatctatttatcctgctgatgaagtcgaa
ggtatgtcggtggcggtacttaacaagcttatcggctttgttgatgcgctgatttggtta
aagcgacaactcagcagtgaaaagaccttaacgaacttcgcagcaattctacgtgaagcc
atggcgctattttactcgtcagattctgaacagagttgggatttacttaagcttgagcag
attatagagaacatcgaaaaacaccatgaaaatggcgatattcaagcgccagtctcagca
aaaatcttagcgtatttggttaagcaaggcgttagagaaaaaggggttgggcagcgcttt
ttagccggagcggtaaacttttgtacgctgatgccgatgcgtgctattccatttaaagtg
gtgtgtatgcttggtctaaatgacgcggactatcctcgtaccgtgcagcctattggtttt
gatttagtcgcacactccacgagacgtaaaggcgatcgctcacgaaaactagacgacaga
tacttgttcttagaagcgttactcagtgcccgagaaaacttgtatatcagttatattggc
cgctcttgttttaacaacgaagcccaagtgccatccgttctagtcagcgaattgactgaa
tatctagatcgcagcttttattttgaagatatgccaaagcagtcgcttgttactcgatta
acttcacaactgccattacaaccttttaatcccgaacattttaaagcaggctcactacag
agctataatcgtacttggctttggcagcatagagcggtgcaagctgatgaaataaaaccg
ttggcaccagttttagacgcagaaattgagtttagcgatttgctgcgcggcgtttgcgag
ccgcaaaagttattttatcagcaagcgctgggcattaaacttaaaccaatagaagcgtta
acactcgatgaagagccttttgcattagatgcattggagcgctatcaatatttagatgaa
gtgctagatgctcagctacaacaacagcccttaaatcttgaacagatattacaacgaggc
tcgctgcctcaagcaaacattggcaaactacagctggagggcctgctcacccgcgttgaa
cctatggttaacgtactggccccattacttaatgagccaaaggagcctctagagctaaaa
cttggtgttgcagagcatatactggttggttggcttgattgtgtgtatgacaacaggcaa
gtgtactatcgtagtgccagtattaaagccaaagatttgattaaagggtttttacatcat
tgcgcggcctgtgtaatggggcatgaagttactacttatattgttgggctagatcaaagc
gtgcactttgccgctatttcaaagccgcaagcacagcaatatttggagcaatggctggct
ttttataagcaagcactgagtgaacctgtggcattttttccaagttctagcatggaatac
gccaagacacaggatattaaaaaggctgtaaataaatttaagccgcaatatgttggtcga
ggagaaggggaagatccctatgttcaactatgctttagcgatttgtcagctcatgaagcg
cgtttttgtgcacttagccttactttgttaacacctattcttgatgccgccgaggaggta
cgccatggagatgcttaa
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