Pseudoalteromonas maricaloris DSM 15914: R5H13_11620
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Entry
R5H13_11620 CDS
T09524
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
R5H13_11620 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmaz01007
]
R5H13_11620 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaz03016
]
R5H13_11620 (aspS)
03029 Mitochondrial biogenesis [BR:
pmaz03029
]
R5H13_11620 (aspS)
Enzymes [BR:
pmaz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
R5H13_11620 (aspS)
Amino acid related enzymes [BR:
pmaz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
R5H13_11620 (aspS)
Transfer RNA biogenesis [BR:
pmaz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
R5H13_11620 (aspS)
Prokaryotic type
Other AARSs
R5H13_11620 (aspS)
Mitochondrial biogenesis [BR:
pmaz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
R5H13_11620 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
WOX27310
LinkDB
All DBs
Position
1:complement(2646540..2648324)
Genome browser
AA seq
594 aa
AA seq
DB search
MRSIYCGNLNKSHVDQEVELCGWINKRRDLGGLIFVDLRDREGLVQVVFDPEVEGLMDKA
NTLRQEFCVQIKGVVRARPESQVNKDMATGEVEILGTGLTIINRSEPLPLDFNQQNSEER
RLKYRYLDLRRLEMSDRIKMRAKASSFVRRFLDENAFLDIETPVLTKATPEGARDYLVPS
RVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMS
SDQVRGVTEKMIREMWQSFLDVDLGEFPVMPYSEAMSKYGSDKPDLRNPLELIDVADIVK
DVEFKVLSGPANDEKGRVAVLSVPGGAQLSRKQIDEYTKFVGIYGAKGLAWMKVNDRDAG
SEGVQSPIAKFLNEEVINALLERTGANTGDIILFGADKRNTVNEAMGALRLKIGLDLEIT
DLTKWAPLWVVDFPMFEEDDEGNLHAVHHPFTAPKGVSAADLEANPAGTLSDAYDMVLNG
YEVGGGSVRIHNNEMQQAAFRILGIEESEQQEKFGFLLDALKYGTPPHAGLAFGLDRLVM
LLCGTDNIRDVIAFPKTTQASCLMTDAPSPANPDALKELAISIEKQLTEQGEGE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcaatatattgcggaaacttaaacaaaagccacgttgatcaagaagtagaacta
tgcggttggatcaataaacgtcgtgaccttggcggcctgatctttgtcgatttaagagat
agagaaggacttgtgcaagtggtattcgatcctgaagtggaaggcttaatggataaagcg
aatacgttgcgccaagagttctgtgttcagatcaaaggtgttgtccgtgcgcgccctgaa
agccaagtaaacaaagacatggcaacgggtgaagttgagatcttaggcactggcttaacc
attatcaaccgttcagaaccattaccgcttgacttcaatcagcaaaactctgaagagcgt
cgtcttaaataccgttatttagacctacgccgtctagaaatgagcgatcgcattaagatg
cgtgctaaagcgagtagctttgtgcgtcgtttcttggatgaaaatgcattcttagacatt
gaaacgccagtactaactaaagcgacacctgaaggtgcacgcgactatctagtaccaagt
cgtgtccacaaaggcagtttctatgcgctaccgcagtcgccgcagctatttaagcagcta
ctaatgatgtctggttttgaccgctactatcaaatcgtaaagtgtttccgtgatgaagac
ttacgtgccgatcgccagccagagttcactcagatcgatatcgaaacgtcatttatgagc
tcagaccaagttcgtggcgtgacagaaaaaatgatccgtgaaatgtggcagtctttccta
gacgttgatttgggtgagttccctgtgatgccatacagcgaagcgatgagcaaatatggt
tcggataaaccagacctacgtaacccgcttgagcttatcgacgttgcagacatcgtaaaa
gacgttgaatttaaagtactaagtggcccagcgaatgacgaaaaaggtcgtgttgcagta
ctatcagtaccaggtggcgcacaactttcacgtaagcaaatcgatgaatatactaagttt
gtaggtatttacggtgcgaaaggccttgcttggatgaaagtgaacgaccgtgatgcgggt
agcgaaggcgtacagtcaccaatcgctaagttcttgaatgaagaagtgatcaatgcactg
cttgagcgcacaggcgcaaacacaggtgacattattctattcggcgcagacaagcgtaat
actgtaaacgaagcgatgggcgcgctacgtctgaagattggtcttgatttagaaatcaca
gatctaactaagtgggcaccactttgggttgttgacttcccgatgttcgaagaagacgac
gaaggtaacctacacgcggtacaccacccgtttaccgcgcctaaaggcgtaagtgctgcg
gaccttgaagcaaatccagcaggtacactttctgatgcatacgatatggtacttaacggc
tacgaagtcggtggcggttcggttcgtattcacaacaacgaaatgcaacaggctgcgttc
aggatcctaggcattgaagagtctgagcagcaagagaagtttggtttcttacttgatgct
ctgaagtatggcacgcctccgcacgcaggtttggcattcggtcttgaccgtttggtgatg
ctactgtgtggcactgacaacatccgtgacgttattgcgttcccgaaaacgacgcaagcg
tcgtgcttgatgactgatgcgccaagccctgcaaacccagatgcgctaaaagagcttgct
atctcaatagaaaagcagttaacagagcaaggtgaaggcgagtaa
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