Pseudoalteromonas maricaloris: R5H13_12345
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Entry
R5H13_12345 CDS
T09524
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
pmaz
Pseudoalteromonas maricaloris
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaz03000
]
R5H13_12345 (pspF)
Transcription factors [BR:
pmaz03000
]
Prokaryotic type
Other transcription factors
Others
R5H13_12345 (pspF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA_2
HTH_8
bpMoxR
AAA
AAA_16
AAA_7
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WOX27452
LinkDB
All DBs
Position
1:2792596..2793687
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AA seq
363 aa
AA seq
DB search
MSRFRQQDNLLGQSDSFLAVLDKVSQLAPLEKPVLIIGERGTGKELIAARLHYLSERWDQ
EYVKLNCAALNENLLESELFGHESGAFTGASKRHEGRFERANSGTLFLDELANTSAMVQE
KLLRVIEYGEFERVGGKQTVKVDTRLVCATNEDLPSLADAGEFRHDLLDRLAFDVITLPP
LRARKEDILLLAEHFAINMARDLGWELFSGFTRKAIEKLLDYPWPGNVRELKNVVERSLY
RHGNDQIPVHDIVFDPFASPFRPSQRIKASSAQPATSATHKVEPLPAAQPNNEQQADPAL
EFDFPCDLKSLSNDYEITMLQKALEFSQFNQKKTAQNLGLTYHQLRGYLKKYNLLDQNQK
QEA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttttcgccaacaggataatttattaggccaatctgacagctttttagctgta
ctagacaaggtttcacagcttgctcctttagaaaagcccgtgcttattattggcgagcgt
ggcacaggtaaagagttaattgcggcacgtttgcattatctctcagagcggtgggatcag
gaatacgtcaaactaaactgcgcagccctaaacgaaaacctcttagagagtgagttattt
ggtcacgaaagtggtgcctttactggtgcaagcaagcgccatgaaggtcgatttgaacgc
gctaacagtggcacactgtttttggatgagttagccaacacttctgcaatggtgcaagaa
aagctcttgcgtgtaattgaatacggcgagttcgagcgagttggcggcaagcaaaccgta
aaagtagatactcgactggtatgcgctaccaatgaagatctcccctctcttgccgatgca
ggagagttcagacacgacttattggaccgcctcgcatttgacgtcatcaccttaccgcca
ttaagagcaagaaaagaagacatcttattattggccgaacattttgcgataaatatggct
cgggatttaggatgggagttatttagcggctttacccgtaaagccatcgagaaactgctt
gattacccgtggcccggtaatgtacgagagctcaaaaatgtggtggagcgtagtttatat
cgtcatggcaatgaccaaattccggttcatgatattgtgtttgacccctttgctagccca
tttaggccgagtcaacggatcaaagcgtcaagcgcccagccagcgacttcagccactcat
aaagttgagcctttgcctgcagcgcaaccaaataacgaacaacaggcagatcctgccctc
gaattcgacttcccttgtgatttaaaatcgctttccaacgactatgaaatcacaatgctg
caaaaggcgcttgaatttagtcaatttaatcaaaagaaaactgcacaaaaccttggtttg
acgtatcatcaactgagaggttatttgaaaaaatacaacctactggaccaaaaccaaaaa
caagaggcatag
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