Pseudoalteromonas maricaloris DSM 15914: R5H13_15710
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Entry
R5H13_15710 CDS
T09524
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R5H13_15710 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaz03019
]
R5H13_15710 (pcnB)
Enzymes [BR:
pmaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
R5H13_15710 (pcnB)
Messenger RNA biogenesis [BR:
pmaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
R5H13_15710 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
WOX30520
LinkDB
All DBs
Position
1:3514526..3515842
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AA seq
438 aa
AA seq
DB search
MASPTPAIIPRSEHGISRKQFSPNAIKVLYRLKDGGYDAYLVGGCIRDIMLGIEPKDFDV
VTNATPEQIKKLFRNCRLIGRRFRLAHIVFGREIIEVATMRGHHQSDDSCATTSQASEHG
QLLRDNVYGSIEEDAERRDFTINALYYSINDFTLRDFAGGVADIKARKIELIGDPETRYR
EDPVRMLRAIRFATKLDMEIATPTRTPIKALAPLLGHIPAARLFEETLKLFLNGKAEENF
LQMREYGLFAQLFPALDKILAQPDNDFERRFIQQMFANTDSRINADKKVTPAFIYAALLW
FPILAKSEALAAEGMNEYDAFMQAINHVLAENAKHVAVPKRFTLGARDIWHIQQRLDKRS
GQRAYRLSLQPRFKAAYDFLLLRVESGEQEQEELAAWWTDYLKNDVTGQKDMVRNLGNQS
KPKRRYNRRKPKRKPKED
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccagcccgacacctgcgataattcctcgcagcgagcatggtatatctcgtaaacaa
tttagccctaacgctatcaaagtgctctatcgcttaaaagacggtggctatgatgcctac
ctagttggtggttgtatacgcgatatcatgctaggaatagagcctaaagactttgatgtc
gttaccaatgcaacacctgaacaaatcaaaaagctcttccgtaactgtcgcttaataggt
cgtcgcttccgccttgcgcacattgtttttggacgtgaaattattgaagttgccaccatg
cgtggccaccatcaaagtgatgattcttgtgccacgacaagtcaagccagcgaacacggg
cagctattacgcgacaatgtctacggcagtattgaagaagacgccgagcgccgcgacttt
actatcaatgcgctatattattcgatcaatgactttactttacgcgactttgccggtggt
gttgctgacattaaagcgcgtaaaattgagctgattggcgaccctgaaactcgctatcgc
gaagatccggtacgtatgctgagagctatccgctttgcaaccaaactggatatggagatt
gctaccccgacccgcactccgattaaagcactagcgccgttacttgggcatattccagct
gcacgcttgttcgaagaaacgctaaagctatttttaaatggtaaagcggaagaaaacttt
cttcagatgcgtgaatacggcttgtttgcacaattattcccggcgttagataaaatccta
gcacagcctgataatgactttgaacgtcgctttattcagcaaatgtttgccaatacggat
agccgtatcaacgcggataaaaaagtaacccctgcatttatctatgcagcacttttatgg
ttcccgattttagctaaaagcgaagcgctcgcggccgaaggtatgaatgaatatgatgcc
tttatgcaagccattaatcacgtccttgctgaaaatgctaaacacgttgctgtgcctaaa
cgctttactttaggtgcccgagatatctggcatattcaacaacgcctagataaacgttca
ggccagcgtgcataccgcctaagcttgcagccgcgattcaaagccgcatatgatttccta
ttattgcgtgttgaaagtggtgagcaagagcaagaagaacttgcagcttggtggactgac
tacctcaagaatgatgtcaccggccaaaaagacatggtgcgcaacttaggtaaccaaagc
aaacctaagcgtcgttataatagacgtaagccaaaaagaaaaccaaaagaagattaa
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